Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01696 ATGCCAAAATCCAAGAGAAATAGACAAGTTACGCTTTCAAAGACGAAGAAAAAGGGAAGAGACCACAAAGAGACGATAGTGAACGGAATAAAAGATGCTGCAGAAAAGTACGGGCACGTGTACGTGTTCTCGTTCGAGAACATGAGGAATCAGAAATTCAAGGAGTTCAGGGACCAGTTGAAATCGAGTAGCAGGTTCTTTCTCGGCTCTAACAAAGTAATGCAAGTTGCTTTAGGTCGCTCTGCTTCGGATGAGATCAGACCCGGCCTTCATAAGGTTTCAAAGCTATTGCGTGGAGATTCTGGGATGGTTTTCACCAATTTGTCAAAGGAAGAAGTTGAAAGGCTGTTTAAAGAATTTGAGGAGTATGACTTTGCAAGAACAGGAAGCAATGCCACTGAAAAGGTGGATCTCAAAGAGGGTCCATTAGAGCAATTCACCCATGAGATGGAACCTTTTCTCAGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCGGATTTTGTTGTTTGTGAGGAAGGAAAGCCTTTGTCACCCGAGGCTTCTCGTATACTGCGTTTAATGGGAATCAAGATGGCTACATTTCGACTTAGCTTAATTTGCAGATGGAGTCCCGATGAGTTTGAACTTTACATCGATGGACCAGATGAATCAGATATCGAATGCTCGTAG 690 0.4319 MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGHVYVFSFENMRNQKFKEFRDQLKSSSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMVFTNLSKEEVERLFKEFEEYDFARTGSNATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLMGIKMATFRLSLICRWSPDEFELYIDGPDESDIECS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01696 229 Gene3D - 125 198 IPR043164 -
Gma08g01696 229 SUPERFAMILY Ribosomal protein L10-like 20 143 IPR043141 -
Gma08g01696 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Gma08g01696 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 228 - -
Gma08g01696 229 MobiDBLite consensus disorder prediction 1 16 - -
Gma08g01696 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Gma08g01696 229 PANTHER RIBOSOME ASSEMBLY FACTOR MRT4 1 228 - -
Gma08g01696 229 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g01696 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Gma08g01696 229 Gene3D - 30 211 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01696 Gma-Chr8 15096841 15099409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01696 35 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 20.809 3.96e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01696 K14815 - gmx:100305462 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01696 08 15096841 15099409 Gma08g01696 08 15096841 15099409 ECH