Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01681 ATGGATATGTGTAACGTAGTGCATGCGTTAAAGCCCATTCTGCTAATGGTGCTGGTGCAGGTTGCAAATGCTTGGGTCAATGTTCTCTACAAGCTCGCGCTTAACGATGGCATGAACTTGAGTATCATTGTTGCTTACCGTTATGTTTTTGCAACTGCTTTCATTGCTCCACTTGCTTTCATTGTTGAAAGGAAAACGAGGACAAAGATGACTTGGACGATACTGTTTCAGGCATTTCTGTGCGGCTTAATTGGTGGAGCATTGCCTCAAAACTTAAACATGGAAGCGATTGCTTTAACTTCAGTAACGTTTACAACAGCCATATCCAACCTCATTCCAGCCATCACTTTTATCATATCCCTCTCCTTCGGATTGGAGAGATTAAATTTAAGAAGAGCAGGAGGGAAGGCGAAGATAATTGGAACAATAACTGGAATTAGTGGGGCAATGCTACTGACATTCATTAAAGGCCCAGAAGTTAAGATGCTGTCTTTCCATGTAAACCTTTTCAACCACCGAAACGGCCATGTCGTACATCCACACGCTACTTCTGGCCTTATGACCATATTTGGTGCTCTCGCTTCTGTCGCAAGCAACGTCTCTTATGCCATGTGGCTTATCATTCAGGCAAAGATGAGTGAAAGATACCCGTGTCCTTATTCGAGCACAGCGTTGATGTCCCTAATGGGGGCAGTGTTATCCATTTCGTTTGCTTTTTGTGTTGAAAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATATCAGACTATTGACTGTGGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTAGCCGTGATTTCGTGGTGTGTACGCACGAGAGGTCCACTGTTTGTCTCCATTTTTAGCCCTCTAATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAACTataccttggaagCATCATTGGATCAATGTTGATTATTTGCGGATTATACGTGGTTCTTTGGGGTAAGAGCAAAGAGATGAAGAAGAATCAATCTGGTCAGTCAGAAAGCACCCATAAATCTGACACAATTGAAATAATGGTCAAACCTCGTGTAGAAGATAAAAGCAACAATAAGAGCAATACCCTCATTAACTCTGTAAATGTGACGGGGGATAATAAAGATTCATGGAAAAATGGACGTGAAAGCAATGTATCACATATACACTGCTGCAAGGTGCAAGAAGAAGTAACATCTCAGAATGTCTCCCGTACCTAA 1242 0.4235 MDMCNVVHALKPILLMVLVQVANAWVNVLYKLALNDGMNLSIIVAYRYVFATAFIAPLAFIVERKTRTKMTWTILFQAFLCGLIGGALPQNLNMEAIALTSVTFTTAISNLIPAITFIISLSFGLERLNLRRAGGKAKIIGTITGISGAMLLTFIKGPEVKMLSFHVNLFNHRNGHVVHPHATSGLMTIFGALASVASNVSYAMWLIIQAKMSERYPCPYSSTALMSLMGAVLSISFAFCVERDLSQWRLGWNIRLLTVAYAGIVVSGVMVAVISWCVRTRGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSMLIICGLYVVLWGKSKEMKKNQSGQSESTHKSDTIEIMVKPRVEDKSNNKSNTLINSVNVTGDNKDSWKNGRESNVSHIHCCKVQEEVTSQNVSRT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01681 413 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 333 - -
Gma08g01681 413 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Gma08g01681 413 Pfam EamA-like transporter family 11 153 IPR000620 GO:0016020|GO:0016021
Gma08g01681 413 PANTHER WAT1-RELATED PROTEIN 11 365 IPR030184 GO:0016021|GO:0022857
Gma08g01681 413 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
Gma08g01681 413 PANTHER WAT1-RELATED PROTEIN 11 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01681 Gma-Chr8 14963490 14969137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01681 3 354 Nodulin-like Gene Family AT1G68170 44.915 3.55e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01681 - - gmx:100788378 800.045