Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01680 ATGAAGGATGTGTGCAATGTGGTGCAGGGATTGAAGCCTGTGCTGCTAATGGTAGTGGTGCAAATAGCATTTGCTGGGGTCAATGTCTTCTACAAGTTCGCGGTAaacgatggcatgagcttgagggtcgttgttgcttaccgctttgtattcgccacagttttcattgctccacttgctctcatcgttgaaagGAAGAAGAGGACAAAGATGACTTGGACGGTACTGTTTCAGTCATTTCTTTGCGGCTTATTTGGGGGATCATTAGCTCAAAATTTCTACTTACAAGCCCTGGCTTTAACTTCTGCAACGTTTGCATCCGCAATGTCGAACCTTATACCAGGCATAACCTTTATCTTGGCCGTTTGCTTCGGTATGGAAAGATTAAATTTGAGAACAGCAGCAGGAAAGGCCAAAATAGTGGGTACATTAATTGGAATTGGTGGGGCAATGGTACTTACTTTCGTTAAAGGTGTGCATATCGAATTCGGGTCCTTTCATTTGAACCTTTTGCATCCCCAAAACGGTACGCACGCACATTCAGCTACCGGTGCTCATACCCTCTTGGGTTCTCTGTGCGCCCTGGCTAGTGGCATCAGCTATGCATTGTGGCTCATCATTCAGGCCAAGATGAGTGAAAGTTACCCTAGACCTTACTCAAGCACGGCGTTGATGTCACTTTGGGGGTCACTGCTGTCCATTGTGTTAGCACTTTGCGTTGAGAGGGACTGGAGTCAGTGGAGGTTGGGTTGGAATATTAGGCTTTTGACTGCAGCATATACGGGTATTGTGGTTTCTGGGGTGATGGTGGTTGTGATTTCATGGTGTGTCCACATGAGAGGCCCATTGTTTGCCTCTGTTTTCAGCCCCCTGATGCTCGTGACGGTGGCCTTGGCTGGTTCTACGATTTTGAACGAGAAGCTACACCTTGGTTGCGTAATTGGAGCAGTGCTGATTGTGTGTGGTTTATATGTGGTATTATGGGGTAAAAGTAAAGAGATGAAGAAGAAGAATCAATTAGTGCCAGCACAAAGCCCCCATGACAATGAATCTAATACGGTCGTCGAAATTGTGGTGAGGTCTGCACAAGAAGATAAAAGCAACCAAAACAAAACCCATGAAATTGTTGCAAAAGTAGTTAGGGATAATGACGATTCATGA 1161 0.4203 MKDVCNVVQGLKPVLLMVVVQIAFAGVNVFYKFAVNDGMSLRVVVAYRFVFATVFIAPLALIVERKKRTKMTWTVLFQSFLCGLFGGSLAQNFYLQALALTSATFASAMSNLIPGITFILAVCFGMERLNLRTAAGKAKIVGTLIGIGGAMVLTFVKGVHIEFGSFHLNLLHPQNGTHAHSATGAHTLLGSLCALASGISYALWLIIQAKMSESYPRPYSSTALMSLWGSLLSIVLALCVERDWSQWRLGWNIRLLTAAYTGIVVSGVMVVVISWCVHMRGPLFASVFSPLMLVTVALAGSTILNEKLHLGCVIGAVLIVCGLYVVLWGKSKEMKKKNQLVPAQSPHDNESNTVVEIVVRSAQEDKSNQNKTHEIVAKVVRDNDDS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01680 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 332 - -
Gma08g01680 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 145 - -
Gma08g01680 386 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Gma08g01680 386 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Gma08g01680 386 PANTHER WAT1-RELATED PROTEIN 12 362 IPR030184 GO:0016021|GO:0022857
Gma08g01680 386 PANTHER WAT1-RELATED PROTEIN 12 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01680 Gma-Chr8 14949909 14954032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01680 11 357 Nodulin-like Gene Family AT1G25270 45.845 1.79e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01680 - - gmx:100787839 748.043