Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01656 ATGGATGCTTTAACCTTAAGCTCAAGTGTGAACATTTCCAAACCATTTCATATCCTTGCACTCTCAAAGAAGCAGCAAAGAGAAAGACATCCTCGTACGCAGTTTGGTGTTTCATGCAGAGGCAGAAAAGAGCTTGGAGGTGGTGTGGAGGACAACTTGTACAAGGTACTAAGCTTGAGTCCCAAAAGTGCAACCACGGATGACATAAAGAAAGCATACAGATCAATGGCGCTTCGGTACCACCCTGATGTGTGCCAGGATTGTTCCAAGAAGGAGGAATCAACGAGGATGTTTGTGCAACTCAACGCAGCTTACCAGACCTTATCGAATCCTAGGCTTCGAGCAGAGTATGACTGTGAATTGGGTTTGAGAAGTGAAAAGATCAGTGTTGGTGATGAGACTTGGAGATATATATGGCAGAATCAACTTGCTGAGTTGAAGAGAAGGTCTCACATACAAACACAATCAAATCACATTTCCGCTTACCCTCCCTTCAACAAACTCCCTCTCCTTCACAACCATGAAGAACCGATCCCCAGTGGCATCACCACACCTACGCGAACTGCCTCCGCGACCCAAACAACACTGACAGATTTGCGCTTTGCGCCGCCACCACCACACCAACAGATATTCGACCCAAACAACACCCCACTCCAACAGATTTGCGCGAAAGCTCTGCAGCATCACCCCATCACCGGCACGCCTCCACTAGCACCACCGCCCCACTGTGCGCAAGCCATCCCACTGAGACCACACCCAGATTCGCCCCCATATCCCGTCTTCAACCACAACAACCAGGTCAGATATGCACGACCCCAACCACGTCACCATGGCACGCGCGCGACGCCGACACCACCCCATCTTCACAATTTGGCGATGAGGGCTGATGGTTGA 894 0.5022 MDALTLSSSVNISKPFHILALSKKQQRERHPRTQFGVSCRGRKELGGGVEDNLYKVLSLSPKSATTDDIKKAYRSMALRYHPDVCQDCSKKEESTRMFVQLNAAYQTLSNPRLRAEYDCELGLRSEKISVGDETWRYIWQNQLAELKRRSHIQTQSNHISAYPPFNKLPLLHNHEEPIPSGITTPTRTASATQTTLTDLRFAPPPPHQQIFDPNNTPLQQICAKALQHHPITGTPPLAPPPHCAQAIPLRPHPDSPPYPVFNHNNQVRYARPQPRHHGTRATPTPPHLHNLAMRADG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01656 297 PRINTS DnaJ domain signature 55 73 IPR001623 -
Gma08g01656 297 PRINTS DnaJ domain signature 73 88 IPR001623 -
Gma08g01656 297 PRINTS DnaJ domain signature 93 113 IPR001623 -
Gma08g01656 297 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 158 - -
Gma08g01656 297 SUPERFAMILY Chaperone J-domain 51 117 IPR036869 -
Gma08g01656 297 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
Gma08g01656 297 SMART dnaj_3 51 113 IPR001623 -
Gma08g01656 297 Gene3D DnaJ domain 48 144 IPR036869 -
Gma08g01656 297 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 158 - -
Gma08g01656 297 CDD DnaJ 52 110 IPR001623 -
Gma08g01656 297 Pfam DnaJ domain 52 118 IPR001623 -
Gma08g01656 297 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Gma08g01656 297 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01656 Gma-Chr8 14733774 14735681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01656 54 118 C2H2 Transcription Factor Family AT1G74250 40.299 1.94e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01656 - - gmx:100783590 311.227