Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01640 ATGGATGCAGAAGCAGCACCGTTGAAGTTGGAGTCCCTTGTGTGCATAGACTCCACCACTCTCTCTCATTCCGAGCTCCTCGCTCTTTCTCTCTCATCTCTCTCCACATTCGACCTCCGCTCCACCCATGACCTCGTCACTCCCAAGATCGACCCTTCCCTCTTCAACGAGAGCACCGGCTCCCACCGCCAAACCTACTCCCGCCCCCAGCAGTCCTCCCCCACCGGCCGCCGCCGCCGCCTCGCCGGCCTCCTCCCCAACAACCTCCCTCCCCTCCCCGAAAACCGCCTCATCATCGACTACCTCAAACAACTCATCAGAGACGACCCCAAGTTCGACCAAGTCCAACTCACTCCCCCTTCCCCTTCTCCTTCTCCTTCTCTCCCCCAACTCAAGAGGAAGCGTGGCAGAAAGCCCAAAGTCAAACTCCACTTGGACCCCTGCTACCGCGGTATCGACATAATTGTCAATCCAAACGGCGTCGCTGTGGATCTCCACCAACTCGCCAACTCCCAAGACCCCTTCGCTGAGGAACTCAAGAGACGCACTGAGGGTTTGCACAACGAAGAGGAGCTGCTAGGGTTTCTGAGAGACTTGCCCGGACAGTGGGGGAGCCGGAGGAAGAAGCGGAGGATCGTCGACGCCGCGGATTTCGGCGGCGACGTCTTGCCTCTTAGCTGGAAGATTCTTCTCGGTTTGAAGAGAAAGGATGGCCGTGCATGGATCTATTGCCGCAGATACATTAGCCCCAGTGGACAGCATTTTGTGTCTTGCAAAGAGGTTTCTTCCTATCTGCAGTCTCTTTTGGATAATAATGGTGATGCACAGTTGCAAATTATGAGGACTGAAAATGTAGTGCAGGAACACAATGTGCCTGCTGAAAATTCTGCAGGTGTTGCCCAGGAGCATCAAGATGAGAGGCAGATTGTTGCTGTGAACTCGGATGTGTCTGCTGCTAATGAACGAGAGAAGGAGGTTGCCTTGTTGGGGATTGAAAATCTCGCGGATGTGCAGATTCACGACCTGTTTGAATGTCGCAAGTGCAACATGAGTTTTGATGCGAAGGATTTGTACTTGCAGCACCTGTTGTCATTTCACCAGAGGACGACGAGGCGGTATCGACTTGGTTCATCAGTTGGAGATGGAGTTATAATTAAGGATGGGAAGTTTGAGTGCCAGTTCTGCCATAAGGTGTTTCTTGAAAGGCGTCGCTACAATGGTCATGTGGGGATCCATGTTAGGAATTATGTGAGGAAAGTTGAAGATTTGCCGGGTCAGGCAAATGTCCAGGGGACAGATGACAAGTCTCCTGTCAGGGGGCAGGATGTGCCTTTAAGGATATCAAAGATGGATGCCCTCATTGAAATTGCTCAAAACTCTATTATGGAGGATTCTGTCACTGAACCCCATAGTTCAGCTAAACTGAATAGGATTCCTGCTTCAGATATTGCTGTTGGTTACATAGATCAAGACAGAAACTCTGAGTCTCCTATCAGTGAACAGAAAATGGAAGATAGCATGACTGGAAATAATGTGGATCATGATTTGGATGAAGAATTAGTAGAGGAAATTGATGATGATAACCATGTGATTAATGTAAAGATGGTTACTTTTCTGGATAACGTGGGTTTGTTATCTGTAAATAAGCAGGATGTTAATGTACCTGAGACTTCTAAGGTAAAAGATGATGTGCCATTGACTATTGAGGAACTGGATCAGTCTGGGATGGATTTGGATGAGGATTCTCACAACTGTTTACTTCCTTTATCTGAACATCACATAATACCAGAATCTGAAAAGAGTGAAAATTCAGGATGTGCTAATACTAAGGGTCTATTTATACTTGATGAAGACATCAGTAACAAGACTGAGTTGGAATTTGGTTTAAATGGCTTGAAGGATGTGCCTGTTACTGTGAGCACTAATGTCCAAGAGATGGTAAGGCCAGCTTCTCAAGAAAATGTGGCACACTCTAGGGTTTTTAACTCCTCCATATCCACAGAACAATCTTTGGATTGTTTACCTGCATTCAGCTCTGATAAGGGAGAAGAACAGTTTTGTAGTGTTGACCATGAACATGATAATGTGAAGGGGTTCCAGGAATTGAGATTTGATGAAATAGATACTGCTGAGTGTGATTTTGCAAGGGTTCAAGTTTCTCCTCTTCCTGATGTACCAACTGAATTGACAAATAACACAGTGGTGGAAGGGACGTGTGCATCCCCAATTCTGTTGGATTCATGTGTCCAGCTTGTAAGGCAAAAATCTCTGGTCAAGTCAATGTGTTATTGGACTGTGGATCGCCAAATGCTGGCTGTCTATAGACTGTGGCAGGCAACCCCATATCATATTTCGTGTGAACTTCAAGCAGAGATTTTAGCTTTGGCAGCTGCATGA 2397 0.4706 MDAEAAPLKLESLVCIDSTTLSHSELLALSLSSLSTFDLRSTHDLVTPKIDPSLFNESTGSHRQTYSRPQQSSPTGRRRRLAGLLPNNLPPLPENRLIIDYLKQLIRDDPKFDQVQLTPPSPSPSPSLPQLKRKRGRKPKVKLHLDPCYRGIDIIVNPNGVAVDLHQLANSQDPFAEELKRRTEGLHNEEELLGFLRDLPGQWGSRRKKRRIVDAADFGGDVLPLSWKILLGLKRKDGRAWIYCRRYISPSGQHFVSCKEVSSYLQSLLDNNGDAQLQIMRTENVVQEHNVPAENSAGVAQEHQDERQIVAVNSDVSAANEREKEVALLGIENLADVQIHDLFECRKCNMSFDAKDLYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEDLPGQANVQGTDDKSPVRGQDVPLRISKMDALIEIAQNSIMEDSVTEPHSSAKLNRIPASDIAVGYIDQDRNSESPISEQKMEDSMTGNNVDHDLDEELVEEIDDDNHVINVKMVTFLDNVGLLSVNKQDVNVPETSKVKDDVPLTIEELDQSGMDLDEDSHNCLLPLSEHHIIPESEKSENSGCANTKGLFILDEDISNKTELEFGLNGLKDVPVTVSTNVQEMVRPASQENVAHSRVFNSSISTEQSLDCLPAFSSDKGEEQFCSVDHEHDNVKGFQELRFDEIDTAECDFARVQVSPLPDVPTELTNNTVVEGTCASPILLDSCVQLVRQKSLVKSMCYWTVDRQMLAVYRLWQATPYHISCELQAEILALAAA 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01640 798 SMART c2h2final6 343 366 IPR013087 -
Gma08g01640 798 SMART c2h2final6 390 412 IPR013087 -
Gma08g01640 798 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 5 764 IPR037472 -
Gma08g01640 798 MobiDBLite consensus disorder prediction 48 88 - -
Gma08g01640 798 ProSitePatterns Zinc finger C2H2 type domain signature. 345 366 IPR013087 -
Gma08g01640 798 MobiDBLite consensus disorder prediction 113 139 - -
Gma08g01640 798 MobiDBLite consensus disorder prediction 52 77 - -
Gma08g01640 798 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 5 764 - -
Gma08g01640 798 ProSitePatterns Zinc finger C2H2 type domain signature. 392 412 IPR013087 -
Gma08g01640 798 ProSiteProfiles Zinc finger C2H2 type domain profile. 390 417 IPR013087 -
Gma08g01640 798 SUPERFAMILY DNA-binding domain 221 269 IPR016177 GO:0003677
Gma08g01640 798 Gene3D Classic Zinc Finger 331 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01640 Gma-Chr8 14597905 14602530 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma08g01640 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01640 - - gmx:100526917 1416.36