Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01612 ATGGCTGCTTTCCAAAGCATCAACAACATTGAAACTCAACAAATTCCACCAGAGCTCCTCATATCTCAAATCATGCAACTCCATGCAAGCATCTCCAAGCTTGAATCCCTAAGGCCATGCAAGCAAGTCAATAGTCACTTCACCCACCTAGTGAAGCTTTGCACCCTCCCTTCAACCATTGACATCGAAGCCTTGCCCAAAGAGGTGCAAGACATGCGTGATAGCCTCATTAACCTAAGTGGCCACGCCGAGGGGCTCCTAGAGCTCGAATTCTCGACCTTCATAAGCCTCACACCTGAGCCAATGAAAAATGTAACCCTATTCCCTTATTACGGGAACTATGTCAAGCTAGCCAACATGGAGAGCAAAATCCTCAAAGAAAACGGGGTTTTGAGCCCTAAGAAAGTGGCCTTTGTAGGGTCAGGGCCAATGCCACTCACCTCCATCGTCATGGCCACTCACCACATGGAATCCACACACTTTGACAACTTTGACATCGACGAAAAGGCGAACGAGGTGGCACGAAAGATCGTGGCTTCGGACTCGGCCCTCGAGAAGAGGATGAAGTTTGAGACACAGGATGTGATGGAAGTGAGGGAGAGATTAGGGCAATATGATTGCATCTTTCTGGCTGCGCTTGTGGGAATGAGTAGGGAAGCAAAAGTGAAGATTTTGGGACATATAAGGAAGTATATGAAGGAGGGAGGGACTTTGCTTGTGAGAAGTGCAAAAGGGGCTAGGGCTTTCTTGTACCCTATTGTTGAGGAACGTGACATGGTGAATTTTGAGGTTCTTACCATCTTTCACCCCACAAATGATGTGATCAACTCAGTTGTTCTTCTTCGCAAGCCTAAAGCTTAA 861 0.4715 MAAFQSINNIETQQIPPELLISQIMQLHASISKLESLRPCKQVNSHFTHLVKLCTLPSTIDIEALPKEVQDMRDSLINLSGHAEGLLELEFSTFISLTPEPMKNVTLFPYYGNYVKLANMESKILKENGVLSPKKVAFVGSGPMPLTSIVMATHHMESTHFDNFDIDEKANEVARKIVASDSALEKRMKFETQDVMEVRERLGQYDCIFLAALVGMSREAKVKILGHIRKYMKEGGTLLVRSAKGARAFLYPIVEERDMVNFEVLTIFHPTNDVINSVVLLRKPKA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01612 286 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 12 286 IPR004298 GO:0030410|GO:0030418
Gma08g01612 286 PANTHER NICOTIANAMINE SYNTHASE 3 9 285 IPR004298 GO:0030410|GO:0030418
Gma08g01612 286 PANTHER NICOTIANAMINE SYNTHASE 9 285 - -
Gma08g01612 286 CDD AdoMet_MTases 164 240 - -
Gma08g01612 286 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 242 IPR029063 -
Gma08g01612 286 Pfam Nicotianamine synthase protein 18 285 IPR004298 GO:0030410|GO:0030418
Gma08g01612 286 Gene3D Vaccinia Virus protein VP39 19 285 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01612 Gma-Chr8 14300580 14301764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01612 19 283 Nicotianamine Synthase Gene Family AT5G56080 51.301 1.07e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01612 K05953 - gmx:100775553 561.222