Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01605 ATGATGGCAATATTGGAGTGTAGTAATAGTTTCCACTTCCTAAATGGGGTTTACATGGTGCTGTTGTTTTGTCTTGGTATTATGGTCCTTGTGAATTCGGTTAATGAAGAGGGTTTGAGTCTGTTGAGATTCAAAGCTTCCCTTCTTGACCCAAACAACAATCTCTATAACTGGGATTCTTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTACTGCACAGGTTCAGTGGTAACTTCTGTGAAACTTTACCAACTCAATCTGTCTGGTGCTTTGGCTCCTTCCATCTGTAATCTTCCAAAGCTTCTTGAGTTGAATTTGTCAAAAAATTTCATCTCTGGCCCCATTCCTGATGGTTTTGTTGACTGTTGTGGTTTGGAGGTTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTGACCCCTATTTGGAAAATCACAACACTTAGAAAGCTTTACTTGTGTGAAAACTACATGTTTGGTGAAGTGCCAGAGGAGCTTGGGAATTTGGTATCACTTGAGGAGTTGGTCATTTATAGCAATAACTTAACTGGAAGAATTCCATCATCAATAGGAAAGTTGAAGCAGCTTAGAGTTATAAGGGCAGGTTTGAATGCACTCTCAGGGCCAATACCTGCTGAAATCAGTGAGTGTGAGAGCTTGGAGATATTGGGGTTGGCACAGAATCAGCTAGAAGGTTCAATTCCAAGGGAGCTACAAAAGCTTCAGAACCTCACCAATATAGTTCTGTGGCAAAACACTTTCTCTGGGGAGATTCCTCCAGAGATTGGAAACATTAGTAGCTTGGAACTGCTTGCTTTGCACCAAAATTCACTGATTGGTGGTGTCCCTAAGGAAATTGGGAAGCTGTCCCAGCTTAAGAGGTTGTACGTGTACACCAACATGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGCACAAAAGCTATTGAGATAGACCTTTCTGAGAACCATTTGATTGGGACCATTCCCAAGGAGTTGGGAATGATCTCTAATCTTAGCTTGCTTCATCTGTTTGAGAACAATCTGCAGGGTCATATTCCAAGGGAGCTTGGTCAGTTGAGGGTGCTAAGAAATTTAGACCTGTCACTGAATAACTTGACAGGTACAATTCCCCTTGAGTTTCAAAACCTTACATACATGGAGGATTTACAGCTGTTTGACAATCAACTTGAGGGTGTGATTCCTCCTCATCTTGGAGTTATTAGAAACCTTACTATTCTTGATATATCTGCAAACAACCTTGTTggtatgatacccatcaatctttgtggatatcagaagctgcaattccttagccttggttcaaataggttgtttggaaacattccttatagcctcaaaacatgcaaatctcttgtgcagcttatgctaggggacaaccttttgacaggaagcctacctgtggaattgtatgagcttcacaatctcaCTGCACTTGAACTCTATCAGAACCAGTTTTCGGGGATAATAAACCCGGGTATAGGCCAACTTAGGAATCTAGAGAGGCTTCGGTTGTCGGCTAACTACTTTGAAGGCTATCTCCCTCCTGAGATTGGAAATTTGCCACAACTGGTCACATTCAATGTTTCCTCTAACCGTTTCAGTGGAAGCATTCCTCATGAGTTGGGAAACTGTGTTAGACTGCAGAGGCTTGATCTTAGCAGGAACCACTTCACTGGCATGCTTCCAAATGAAATTGGCAACTTGGTGAACTTGGAGCTGTTGAAAGTTTCTGATAACATGCTCTCAGGAGAAATACCAGGCACTTTGGGGAATCTTATTAGGCTCACAGACCTGGAACTAGGTGGCAACCAGTTTTCAGGAAGCATCTCTTTTCACTTGGGAAGACTGGGAGCTCTTCAGATTGCACTTAACCTGAGCCATAACAAACTTTCTGGCTTAATTCCTGATAGCCTTGGGAACTTGCAAATGCTAGAGTCCCTTTATCTAAATGACAATGAACTTGTTGGTGAAATTCCTTCATCAATTGGTAACCTTCTCAGTCTTGTAATATGCAATGTATCTAACAACAAGCTGGTAGGAACTGTTCCAGACACCACTACATTTAGAAAGATGGATTTCACAAACTTTGCTGGGAACAACGGCTTGTGCCGTGTTGGTACCAATCATTGCCATCAATCTCTATCTCCCTCTCATGCTGCAAAACATAGCTGGATCAGAAATGGTTCATCAAGGGAAATTATAGTGAGTATTGTTTCTGGGGTGGTTGGACTAGTTTCTCTAATTTTCATAGTGTGTATATGTTTCGCCATGAGGCGGCGTAGCCGTGCTGCTTTTGTTTCACTTGAAGGGCAAACAAAGACTCATGTCTTAGATAACTACTACTTTCCTAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACAGGAAATTTTTCAGAAGCTGCAGTTCTAggaagaggagcttgtggcactgtttacaaggctgctatgagtgatggtgaagttattgctgtcaagaaactgaattcccgtggagaaggagcgaataatgttgacaaaagcttccttgctgagatttcaactcttggaaagatcaggcacaggaacattgtgaagctgtatggattttgctaccatgaggattctaatcttctcttgtatgaatacatggaaaatggaagccttggagaacaacttcattcaagtgcaaccacttgtgcattggattggggtagtcgatataaaattgctctcggagcagcagaaggcttatgctatcttcattatgattgtaagcctcagatcatccatcgcgatataaagtcaaacaacatattgcttgatgaggtgtttcaggctcatgttggagactttggcttggctaagttgattgatttttcctactcaaaatccatgtctgctgtggcaggttcatatggctacattgccccagaatatgcttacaccatgaaggtgactgagaagtgtgacatctatagctttggggtagtTTTGCTGGAACTAATTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGAGATTTAGTGACTTGTGTGAGAAGAGCAATTCAAGCATCAGTACCAGCATCTGAATTATTTGACAAGAGATTGAATCTTAGTGCACCAAAGACAGTTGAAGAAATGTCTCTAATTCTTAAAATAGCCCTGTTCTGCACCAGCACATCTCCACTAAATAGACCTACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGGGAATATGTCAGCAACTCACCAACCTCTCCCACATCAGAATCTCCATTGGATGAGGATGATGGCATTTCTTCCAAAGATGGTGGTTTTGAGTTagccaggttttggattgatttgtttgacaagaagATAGCTGATTGTGGCAGGAGACTGTGGGCTAGCAAGGGAGAAGACCAAGAGGCTGCAAAGAAAGAGTTTGTGGAGTGCTTGAAACTCTTGGAAAATGAACTTGGAGACAAGCCTTATTTTGCTGGTGATTATTTTGGCCTTTTGGATATAGCCTTGTTACCAATTACGTGCAGGTTTTACACATACGAGACATTTTGCAAATTTAGTGTGGAGAAAGAATGCCCAAGGTTCATGGCATGGGTCAAAAGGTGTAATCAGAGGGAGAGTGTTTCCAAGACACTTCCTGACCCATATAAAGTCTATGACTTCGCGTTGGAGACGAAAAAAAGGTTCAATATTGAGTGA 3738 0.3328 MMAILECSNSFHFLNGVYMVLLFCLGIMVLVNSVNEEGLSLLRFKASLLDPNNNLYNWDSSSDLTPCNWTGVYCTGSVVTSVKLYQLNLSGALAPSICNLPKLLELNLSKNFISGPIPDGFVDCCGLEVLDLCTNRLHGPLLTPIWKITTLRKLYLCENYMFGEVPEELGNLVSLEELVIYSNNLTGRIPSSIGKLKQLRVIRAGLNALSGPIPAEISECESLEILGLAQNQLEGSIPRELQKLQNLTNIVLWQNTFSGEIPPEIGNISSLELLALHQNSLIGGVPKEIGKLSQLKRLYVYTNMLNGTIPPELGNCTKAIEIDLSENHLIGTIPKELGMISNLSLLHLFENNLQGHIPRELGQLRVLRNLDLSLNNLTGTIPLEFQNLTYMEDLQLFDNQLEGVIPPHLGVIRNLTILDISANNLVGMIPINLCGYQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGDNLLTGSLPVELYELHNLTALELYQNQFSGIINPGIGQLRNLERLRLSANYFEGYLPPEIGNLPQLVTFNVSSNRFSGSIPHELGNCVRLQRLDLSRNHFTGMLPNEIGNLVNLELLKVSDNMLSGEIPGTLGNLIRLTDLELGGNQFSGSISFHLGRLGALQIALNLSHNKLSGLIPDSLGNLQMLESLYLNDNELVGEIPSSIGNLLSLVICNVSNNKLVGTVPDTTTFRKMDFTNFAGNNGLCRVGTNHCHQSLSPSHAAKHSWIRNGSSREIIVSIVSGVVGLVSLIFIVCICFAMRRRSRAAFVSLEGQTKTHVLDNYYFPKEGFTYQDLLEATGNFSEAAVLGRGACGTVYKAAMSDGEVIAVKKLNSRGEGANNVDKSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSATTCALDWGSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGRSPVQPLEQGGDLVTCVRRAIQASVPASELFDKRLNLSAPKTVEEMSLILKIALFCTSTSPLNRPTMREVIAMLIDAREYVSNSPTSPTSESPLDEDDGISSKDGGFELARFWIDLFDKKIADCGRRLWASKGEDQEAAKKEFVECLKLLENELGDKPYFAGDYFGLLDIALLPITCRFYTYETFCKFSVEKECPRFMAWVKRCNQRESVSKTLPDPYKVYDFALETKKRFNIE 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01605 1245 Pfam Protein kinase domain 813 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01605 1245 Gene3D Ribonuclease Inhibitor 145 238 IPR032675 -
Gma08g01605 1245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 935 947 IPR008271 GO:0004672|GO:0006468
Gma08g01605 1245 SMART serkin_6 811 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01605 1245 Gene3D - 1120 1245 - -
Gma08g01605 1245 Gene3D Transferase(Phosphotransferase) domain 1 890 1103 - -
Gma08g01605 1245 Pfam Glutathione S-transferase, C-terminal domain 1148 1214 - -
Gma08g01605 1245 SUPERFAMILY GST C-terminal domain-like 1120 1241 IPR036282 -
Gma08g01605 1245 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 1096 - -
Gma08g01605 1245 PANTHER OS07G0152200 PROTEIN 18 1096 - -
Gma08g01605 1245 Gene3D Ribonuclease Inhibitor 239 430 IPR032675 -
Gma08g01605 1245 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Gma08g01605 1245 SUPERFAMILY L domain-like 76 425 - -
Gma08g01605 1245 SMART LRR_typ_2 100 124 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 172 196 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 580 604 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 653 677 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 484 508 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 532 556 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 557 579 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 292 316 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 364 387 IPR003591 -
Gma08g01605 1245 SMART LRR_typ_2 628 652 IPR003591 -
Gma08g01605 1245 Pfam Leucine Rich Repeat 558 580 IPR001611 GO:0005515
Gma08g01605 1245 Pfam Leucine Rich Repeat 635 653 IPR001611 GO:0005515
Gma08g01605 1245 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1114 1242 IPR010987 -
Gma08g01605 1245 Coils Coil 1244 1245 - -
Gma08g01605 1245 Gene3D Ribonuclease Inhibitor 38 144 IPR032675 -
Gma08g01605 1245 Gene3D Phosphorylase Kinase; domain 1 775 889 - -
Gma08g01605 1245 SUPERFAMILY RNI-like 369 692 - -
Gma08g01605 1245 CDD GST_C_Tau 1120 1237 IPR045074 GO:0004364|GO:0006749
Gma08g01605 1245 SUPERFAMILY Protein kinase-like (PK-like) 788 1085 IPR011009 -
Gma08g01605 1245 ProSiteProfiles Protein kinase domain profile. 811 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01605 1245 Gene3D Ribonuclease Inhibitor 432 726 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01605 Gma-Chr8 14243304 14254435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01605 60 1090 Receptor kinase-like Gene Family AT1G73080 37.546 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma08g01605 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01605 - - gmx:100818311 2203.71