Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01599 ATGACTTGTTTTCCTTTATTATTCAGTAAGTCGTCTTCTTCTTCTGCGAGACACGAACCAGAAATTGATGAAGGCATTCATAATGTTAAACTCTACTCCTACAAAGAGCTAAGAAAtgccactgaagattttagtccagccaataaaattggagagggtggttttggttctgtctacaagggacggcttaaagatggaaaagttgctgcaataaaagttctttcagctgaatcaagacaaggggtgaaggagttcttgactgagattaatgtgatctctgagatacagcatgaaaatttggtcaagctatatggttgctgtgtggaaaaaaataacagaatattagtctacaattaccttgagaacaacagcctatcacaaactcttctagGTGGAGGTCACAGTAGTCTCTACTTTGATTGGCGAACACGATGTAAAATATGCATTGGGGTTGCACGTgggcttgcctatcttcatgaagaagtgaggcctcatattgttcatagggatataaaagcaagcaatatcctccttgacaaagatcttacacccaagatttcagattttggtcttgcaaagcttattccagcaaacatgactcatgtcagcacacgtgtagcaggaacaatAGGTTATTTGGCACCAGAGTATGCGATAGGAGGGAAGCTAACAAGGAAAGCAGACATTTACAGCTTTGGCGTCCTCCTTGGGGAAATAATCAGTGGAAGATGTAACACAAACTCACGACTACCAATAGAAGAACAGTTTCTTCTAGAGAGGACATGGGACCTTTATGAGCGAAAGGAATTGGTTGGACTGGTGGATATGTCACTAAATGGGGAATTCGATGCTGAGCAGGCTTGTAAGTTTCTGAAGATTGGCCTTCTTTGCACTCAAGAATCCCCAAAGCACCGGCCATCCATGTCTTCTGTGGTCAAGATGCTCACTGGAAAAATGGATGTTGATGACAACAACCATGATACTACCACGTCATTTGCCACAACTACAACCTTCACAGCAACATATGATGAAAGCGTGTAA 1041 0.244 MTCFPLLFSKSSSSSARHEPEIDEGIHNVKLYSYKELRNATEDFSPANKIGEGGFGSVYKGRLKDGKVAAIKVLSAESRQGVKEFLTEINVISEIQHENLVKLYGCCVEKNNRILVYNYLENNSLSQTLLGGGHSSLYFDWRTRCKICIGVARGLAYLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGKLTRKADIYSFGVLLGEIISGRCNTNSRLPIEEQFLLERTWDLYERKELVGLVDMSLNGEFDAEQACKFLKIGLLCTQESPKHRPSMSSVVKMLTGKMDVDDNNHDTTTSFATTTTFTATYDESV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01599 346 CDD STKc_IRAK 50 317 - -
Gma08g01599 346 Gene3D Phosphorylase Kinase; domain 1 14 119 - -
Gma08g01599 346 ProSiteProfiles Protein kinase domain profile. 44 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01599 346 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01599 346 PANTHER - 2 332 - -
Gma08g01599 346 Pfam Protein kinase domain 47 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01599 346 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Gma08g01599 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Gma08g01599 346 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 332 - -
Gma08g01599 346 SUPERFAMILY Protein kinase-like (PK-like) 23 316 IPR011009 -
Gma08g01599 346 Gene3D Transferase(Phosphotransferase) domain 1 120 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01599 Gma-Chr8 14147974 14151126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01599 32 321 Receptor kinase-like Gene Family AT1G53430 58.276 5.11e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g01599 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01599 - - gmx:100816707 631.713