Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01598 ATGGCCTCTTCAGTGATGGCATCTGTGGCCCTCAAACCTGCCCCTTTCACTGTTGAGAAGTCCTCAGTTAGAGGCCTTCCCTCCCTCTCAAGGAACTCCTCTTCATTCAGAGTTGTGGCCAGTGGTGGCAAGAAGATCAAGACTGACAAGCCTTATGGAATTAATGGTGGCATGGCTTTGAGGGAAGGAGTTGATGCATCTGGCAGGAAAGGAAAGGGAAAGGGCGTTTACCAGTTTGTAGACAAATACGGTGCTAATGTCGATGGTTACAGTCCTATCTACGACACCAAGGACTGGTCTCCAACCGGTGATGTCTACGCTGGCGGTACGACTGGCTTGGCTATCTGGGCTGTGACTCTACTTGGTCTTCTTGCTGGTGGTGCACTTCTTGTCTACAACACAAGTGCTTTGGCGCAATAA 420 0.5024 MASSVMASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMALREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTLLGLLAGGALLVYNTSALAQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01598 139 Pfam Photosystem II 10 kDa polypeptide PsbR 41 138 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
Gma08g01598 139 PANTHER PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC 1 139 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
Gma08g01598 139 PANTHER BNAANNG27100D PROTEIN 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01598 Gma-Chr8 14128724 14131828 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01598 K03541 - gmx:100499745 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01598 08 14128724 14131828 Gma08g01598 08 14128724 14131828 ECH