Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01564 ATGGAGCAGAGATTTCAATATCTCTCTTTCCGTGAGACTGTTTTAGAGAGGTCTTGCTGTACAGTGATGAGCAAGTCACCTAACAGACACAACCGTCTGTACATGGAAGCAAGGCCCATGGAGGCTGGACTCGCAGAGGCTATTGATGATGAAAAGATTGGACCAGGGGTTGCCCCAAAGATAGGTCTAAAATATTGTCAGAAGTGTTTGGTTGGGAAAAGGATATGGACAAGAAAATATGATGTTTTGGCCCCGATGAGGAGGTGGTCAGATCATTTCAACTGTGCTAGAAGAGCCTGCTATGCAGCCATGCTGACAGCAAAACCGAGACTTCTTGAGCCCGTGTATCTGGTGGAAATACAGGCACCTGATCAGGCTCTTGATGGTGCATACAGTGTTCTTAACCAGAAAAGAGGGCACGTGTTTGAGGAATGCCAGAGGCCCGGCACCCCACTTCACAATGTCAAGGCATATTTGCCTCCATCTGATCCACTAGAACCTGTCACTCCTGCTGCTGCTCGTGTTGCGGAGATAAGAAGGAAGAAAGGCTTTGATGTAGAAATGAGGCCTCTCTCTGAGTTTGAGGACAGACTTTGA 597 0.4757 MEQRFQYLSFRETVLERSCCTVMSKSPNRHNRLYMEARPMEAGLAEAIDDEKIGPGVAPKIGLKYCQKCLVGKRIWTRKYDVLAPMRRWSDHFNCARRACYAAMLTAKPRLLEPVYLVEIQAPDQALDGAYSVLNQKRGHVFEECQRPGTPLHNVKAYLPPSDPLEPVTPAAARVAEIRRKKGFDVEMRPLSEFEDRL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01564 198 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 93 160 - -
Gma08g01564 198 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 161 197 - -
Gma08g01564 198 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 112 IPR020568 -
Gma08g01564 198 Gene3D - 16 85 IPR014721 -
Gma08g01564 198 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 8 72 - -
Gma08g01564 198 SUPERFAMILY EF-G C-terminal domain-like 113 162 IPR035647 -
Gma08g01564 198 Gene3D - 102 166 - -
Gma08g01564 198 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 72 - -
Gma08g01564 198 Pfam Elongation factor G C-terminus 110 160 IPR000640 -
Gma08g01564 198 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 93 160 - -
Gma08g01564 198 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 161 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01564 Gma-Chr8 13828680 13829538 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01564 8 198 Eukaryotic Initiation Factors Gene Family AT1G56070 45.035 5.29e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01564 K03234 - gmx:100787816 229.565