Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01563 ATGGCTGCGCTTCACGTCACTGATGGAGCACTTGTGGTGGTGGACTGTGTTGAGGGTGTCTGTGTCCAGACAGAAACTGTGCTGAGACAGGCCCTTGGAGAAAGGGTTAAGCCTGTTTTGGTTGTTAACAAGATGGATAGGTGCTTCCTTGAACTCCACCTTGATGCAGAGGAGGCATACCTTACATTTCAGAGGGTTGTTGAGAGTGCAAATGTGATCATGGCAACCTATGAAGATGCAGCACTTGGTGATATTCAGGTATACCCTGAAAAGGGAACAGTTGCTTTTTCTGCTGGCTTGCATGGATGGGGTTTTACACTCACCAACTTTGCCAAGATGCATGCTTCCAAGTTTGGAGTTGATGAGGCAAAGATGATGAGTAGGCTTTGGGGTGAGAATTTCTTCGACTCTGCTACCAGAAAGTGGACCTACAAGCATACCGGGACTTCTACGTGCAAGCGCGGCTTTGTTATGTTCTGCTATGAACCGATCAAACAGGTTATTGAACTTTGCATGAGCGACCAGAGGGATGAGCGGAGGCCCAAGTTGCAAAAGGAGTTGACAGGAGACAGGAGAGCATATAATATCTGCTGCTGGTGA 600 0.4783 MAALHVTDGALVVVDCVEGVCVQTETVLRQALGERVKPVLVVNKMDRCFLELHLDAEEAYLTFQRVVESANVIMATYEDAALGDIQVYPEKGTVAFSAGLHGWGFTLTNFAKMHASKFGVDEAKMMSRLWGENFFDSATRKWTYKHTGTSTCKRGFVMFCYEPIKQVIELCMSDQRDERRPKLQKELTGDRRAYNICCW 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01563 199 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 139 IPR000795 GO:0003924|GO:0005525
Gma08g01563 199 Pfam Elongation factor Tu GTP binding domain 2 106 IPR000795 GO:0003924|GO:0005525
Gma08g01563 199 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 2 185 - -
Gma08g01563 199 Gene3D - 1 106 IPR027417 -
Gma08g01563 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 182 IPR027417 -
Gma08g01563 199 Gene3D Yeast translation eEF2 (G' domain) 107 192 - -
Gma08g01563 199 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 2 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01563 Gma-Chr8 13828033 13828632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01563 2 185 Eukaryotic Initiation Factors Gene Family AT1G56070 79.348 4.14e-105 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01563 K03234 - gmx:100790826 322.783