Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01559 ATGGGTGTGAACGAAGATTTCAACAAGGATATTGATGATCATCATCATGAGTATGTGGATGATGATGATGTTCCTCTTCCGGGGTTTCGTTTCCACCCTACAGATGAAGAACTTGTTAGTTTCTATCTTCGAAGGAAGCTTCACAAGAAACCCATCAGCATCGAGCTCATCAAACAGATTGATATTTACAAATACGATCCTTGGGATCTTCCAAAAACCAGTGCCACTGCAGAAGAGAAAGAAGGGTACTTCTTTTGCAGAAGAGGGAGGAAGTATAGGAACAGCATAAGGCCTAACAGAGTCACTGGCTCTGGGTTCTGGAAAGCAACTGGCATAGACAAGCCAGTGTACTCACATGGAGGAGAAGGAAATGACTGCATTGGCCTAAAAAAAACACTGGTGTACTACCGTGGCAGTGCAGGCAAAGGCATCAAAACTGATTGGATGATGCACGAGTTTCGCCTTCCTTCTAACAAAGACAACACCACCAACCTTCCCAGCTCCAAGAATTACGTAGATGTTCCCCAAGAAGCTGAAATTTGGACATTGTGTCGAATATTCAAGAGAAATGTCTCACAGAGAAAGCACACGCCAGACTTGAAACAATTATCTGCTAAGCGCCACTCCATTCATGACAAGAACTCAAGAATGAGCAACGTGGAGTTCAACAATACTAATCAAGAATCATATATAAACTTTGGTGGCCACTATCAGAATGAGCAGAAACCCGTGATTAACTACACAAACAGTGATCAAAGGAATCAGTATCATGTGATGACTCATCAGTTGTTTGCTGCTCCAGTGGCACAGCATCATCAGCAACCTCAACAACTAACTTCTCCATCTTCTAACTTTTGGCTTAACAGCCCTCCTGGGAACGACTTCTTCACGTTTGATAACTGGGATGAGCTTGGATCTGTAGTGAAGTTTGTGGTTGATTAG 942 0.4299 MGVNEDFNKDIDDHHHEYVDDDDVPLPGFRFHPTDEELVSFYLRRKLHKKPISIELIKQIDIYKYDPWDLPKTSATAEEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCIGLKKTLVYYRGSAGKGIKTDWMMHEFRLPSNKDNTTNLPSSKNYVDVPQEAEIWTLCRIFKRNVSQRKHTPDLKQLSAKRHSIHDKNSRMSNVEFNNTNQESYINFGGHYQNEQKPVINYTNSDQRNQYHVMTHQLFAAPVAQHHQQPQQLTSPSSNFWLNSPPGNDFFTFDNWDELGSVVKFVVD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01559 313 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 11 310 - -
Gma08g01559 313 SUPERFAMILY NAC domain 25 189 IPR036093 GO:0003677|GO:0006355
Gma08g01559 313 Gene3D NAC domain 34 193 IPR036093 GO:0003677|GO:0006355
Gma08g01559 313 ProSiteProfiles NAC domain profile. 25 189 IPR003441 GO:0003677|GO:0006355
Gma08g01559 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 310 - -
Gma08g01559 313 Pfam No apical meristem (NAM) protein 27 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01559 Gma-Chr8 13796407 13799223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01559 22 204 NAC Transcription Factor Family AT1G26870 63.043 2.07e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma08g01559 NAM 2.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01559 - - gmx:100808692 647.121