Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01554 ATGAAGGAAAGTGGAAGGAAACAAGGTACCATGTCGCCATGTGCGGCATGCAAGCTTCTTCGAAGGAGATGCACGCGAGATTGCGTGTTTGCTCCTTATTTTCCTGCTGATGAACCCCAGAAGTTTGGTAGTGTTCACAAGGTTTTCGGGGCTAGCAATGTAAACAAAATGTTACAGGAATTACCTGAGCACCAAAGAAGTGATGCAGTTAGTTCAATGGTATATGAAGCCAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTTCAACAACAAGTTGATGTGCTCCAAACCCAATTGGCACTAGCACAAGCAGAGGTTGTGCACATGAGAATGCGCCAATTCTCACCACCATCAGAACAACAACAACCCTCAGTGCTTCCTGAAGCCTCCAATTCATCATCAGAGAACTTGTACCACTCAAGCAGACTCTTGTCTTCACAAACCAAGTCCCTTTTTGGCATGGACATGGTCGTTGATCAGGCCAACATGGGGCAATCCTTGTGGTCATACTAG 534 0.4682 MKESGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRQFSPPSEQQQPSVLPEASNSSSENLYHSSRLLSSQTKSLFGMDMVVDQANMGQSLWSY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01554 177 MobiDBLite consensus disorder prediction 120 147 - -
Gma08g01554 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 174 - -
Gma08g01554 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 174 - -
Gma08g01554 177 Coils Coil 92 112 - -
Gma08g01554 177 MobiDBLite consensus disorder prediction 121 147 - -
Gma08g01554 177 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Gma08g01554 177 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01554 Gma-Chr8 13742979 13747353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01554 1 176 AS2 family AT1G31320 67.045 6.93e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma08g01554 LOB 3.3e-43 No_clan