Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01550 ATGGCAGCGCCGAACAGGATCGAACGCGCCCACCAGATGTACCGCGACGGACGTTACGAAGAGGCGTTAGGGTTCTACACGGAGGCAATCGCCATGGCCAAGACCAACCCTCAGAAGATCGCTTTGCATAGCAACCGAGCCGCGTGCTATCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACTTCAGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTAGTCACCCTGAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGACTCTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGTTTGAAGACACAATTGGCACTTACTCCAATACCAGAATCAGAAGAAGAGGAGTTTGAAGAACAGGAAGATGAGGAGCCTGAAGTGATATCACAAAGGGAGAATGAAAACAAAGAGATGGGAGAGAAATATTCGTCGATTTCTAATATTGGGACAGATCAAAAGGTTGAGCTTGGCAAAGGTATTATTATTGCTGATTGTGCTCCCCATGAAACAGACCTCAAGTTTTCATCCAAGCAAGGAAGAAACCAAAACAATGAGCCTAAGAAGTCCACAGCAGATGCTATAGCTCCTAAAGCACCAAACAAGGAATCTACCGAGCAACATTCAAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTACGCACGGTGGGACAGTGTTGAAGATGATTCCAGTGATGATGACGATGAAGATGAAGATGAAGAGTCTCTGCCTCAGTACCGATTTCGTGCTGATTTGTTTATATCATATGAGAAGCTTTCATCACTAAATTATGTGACTCCCCTCCCCTTTTTCCCCACACGGCTCTAA 894 0.4519 MAAPNRIERAHQMYRDGRYEEALGFYTEAIAMAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLALTPIPESEEEEFEEQEDEEPEVISQRENENKEMGEKYSSISNIGTDQKVELGKGIIIADCAPHETDLKFSSKQGRNQNNEPKKSTADAIAPKAPNKESTEQHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDDEDEDEESLPQYRFRADLFISYEKLSSLNYVTPLPFFPTRL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01550 297 SUPERFAMILY TPR-like 7 120 IPR011990 GO:0005515
Gma08g01550 297 MobiDBLite consensus disorder prediction 128 145 - -
Gma08g01550 297 Pfam Anaphase-promoting complex, cyclosome, subunit 3 17 94 - -
Gma08g01550 297 MobiDBLite consensus disorder prediction 191 266 - -
Gma08g01550 297 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 272 - -
Gma08g01550 297 MobiDBLite consensus disorder prediction 125 163 - -
Gma08g01550 297 MobiDBLite consensus disorder prediction 248 263 - -
Gma08g01550 297 Gene3D Tetratricopeptide repeat domain 2 154 IPR011990 GO:0005515
Gma08g01550 297 SMART tpr_5 74 107 IPR019734 GO:0005515
Gma08g01550 297 SMART tpr_5 40 73 IPR019734 GO:0005515
Gma08g01550 297 SMART tpr_5 3 36 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01550 Gma-Chr8 13689074 13692307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01550 2 121 Calmodulin-binding Proteins AT3G25230 32.576 1.43e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01550 - - gmx:100801778 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01550 08 13689074 13692307 Gma08g01550 08 13689074 13692307 ECH