Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01546 ATGAAGCAGCTCATCCGCCGCCTCTCGCGCGTGGCTGACTCCTCCAACTACACGCTCCTCCGTTCGGACTCCTCCCAGGCCTGCcaccaccgccgcccacgcgccgagtccttccgtctctccgccccatccaagatccgccgctcctccgcggcggtggttccggaggggcacgtcccgatctacgtcggcgacgagatggagcgcttcgtcgtgtgcgccgagctcctcaaccaccccgtcttcgtcaagctcctcaacgaatccgcgcaggaatacggctaCGAGCAGAAAGGAGTGCTCCGGCTGCCGTGCCGCGTCTTCGTCTTCGAGCGTGTTCTCGACGCGCTTCGTCTCGGACTCAACGCGCGTGACATCGCCGAGCTCGTAAATTTCTCGCCGGAAGAGTTTTCCTGA 417 0.3237 MKQLIRRLSRVADSSNYTLLRSDSSQACHHRRPRAESFRLSAPSKIRRSSAAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNESAQEYGYEQKGVLRLPCRVFVFERVLDALRLGLNARDIAELVNFSPEEFS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01546 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 133 IPR003676 GO:0009733
Gma08g01546 138 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 133 - -
Gma08g01546 138 Pfam Auxin responsive protein 8 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01546 Gma-Chr8 13623178 13623843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01546 49 117 Calmodulin-binding Proteins AT2G24400 40.580 3.03e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01546 K14488 - gmx:100806044 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01546 08 13623178 13623843 Gma08g01546 08 13623178 13623843 ECH