Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01542 ATGCGAAGCTGCATCATCAACCTCTGGATCGTGGCGGCACTCGTCGTCCCCGTGCTCCTCTCTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCACTTCTTCTTTCTCCGATTCTTCTACCTTTTCTTTGAAGCTTGCAAATGGATTTGGCTTCTATGCTGTCTCTTTCCCTTTCAACCAAAGGATACGTGATGGGTCCAATCTCGAATACGATTTCTATAGGGACACGTGTCCCCAAGCGGAGGGTGTTGTTCGTTCGGCGCTCACTCGCATATACTTCGACCACAGGGACGTTGCACCTGCTCTGCTTCGTCTCTTCTTCCACGATTGCTTCATCGAGGGGTGTGATGCTTCTTTGCTGTTGGATGAGAACAATGGTGATAGAAACCGTTCGGTGGAGAAGCAGGCTGTGCCAAATCAGACATTGAGAGGTTTTGACAAAATTGAGCTGATAAAAGAAGAGGTGGAACAAGCATGTCCCGGGATTGTGTCTTGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTCTTCTGGCTGGTGGACCTTTCTATCCAGTTTTAACAGGAAGAAGGGATAGCCATCAATCATTTTTTGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGCACACTAAATCTCTTCAATCTCAGAGGATTCAATGCAAGAGAAACAGTCAGCCTTCTTGGAGGACACAACATTGGCAAAATCGGCTGCGACTTCATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAACCAGACCCCAGCATCCCCCTCGATTTCCTTCGCCAGATGAGGCTAAACTGCCCAGACAGCAAGAACAGCAGCACCAGCATAGACGAGTTTACGATCTCAAAGCCAGTGAGCAGTGATTTCCACTCCAAAATGGGGATGTCATACATGCAGGCACTGTCATCTTCAGTGTCATCAGGAGCATCATTTGACACTCACTACTACCAGAGCCTGCTAAGAGGAAGAGGGCTTCTTTTCGCGGATCAGCAGCTGATGGCCGAGCAGAAAACCGCCAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGAATGGACTTTGCTAGGGTCATGTTGAAAATGTCTAACCTTGATGTTCTAACTGGACTTCAAGGTCAGGTTCGAGTCAATTGCTCACTACCTGTGTCTTCTTAA 1200 0.4783 MRSCIINLWIVAALVVPVLLSLRSPRGETQTQTTSSFSDSSTFSLKLANGFGFYAVSFPFNQRIRDGSNLEYDFYRDTCPQAEGVVRSALTRIYFDHRDVAPALLRLFFHDCFIEGCDASLLLDENNGDRNRSVEKQAVPNQTLRGFDKIELIKEEVEQACPGIVSCADILALAARDSILLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLNLFNLRGFNARETVSLLGGHNIGKIGCDFIQQRLYNFQGTGQPDPSIPLDFLRQMRLNCPDSKNSSTSIDEFTISKPVSSDFHSKMGMSYMQALSSSVSSGASFDTHYYQSLLRGRGLLFADQQLMAEQKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRVNCSLPVSS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01542 399 Pfam Peroxidase 86 360 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 SUPERFAMILY Heme-dependent peroxidases 70 395 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Haem peroxidase superfamily signature 101 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Haem peroxidase superfamily signature 165 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Haem peroxidase superfamily signature 183 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Haem peroxidase superfamily signature 316 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 Gene3D - 73 394 - -
Gma08g01542 399 ProSiteProfiles Plant heme peroxidase family profile. 69 397 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 Gene3D Peroxidase, domain 2 209 376 - -
Gma08g01542 399 CDD secretory_peroxidase 69 394 IPR033905 GO:0004601|GO:0042744
Gma08g01542 399 ProSitePatterns Peroxidases active site signature. 101 112 IPR019794 GO:0004601
Gma08g01542 399 PANTHER PEROXIDASE 25-RELATED 74 394 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 79 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 103 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 145 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 164 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 230 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 314 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 330 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PRINTS Plant peroxidase signature 371 384 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g01542 399 PANTHER PEROXIDASE 74 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01542 Gma-Chr8 13516436 13519360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01542 66 394 Peroxidase AT4G33870 46.608 1.59e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01542 K00430 - gmx:100804973 753.436