Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01541 ATGGCCTCTGCCACCACTCTCTTCACCCCTAACCCCATGTTTTCAACTGAACACCACTCTCTCTCTCCATCTCCAACCATTCCCAAATCCTTCACTGGCCTCTGCAAGCCCTTCCATTCAAGGGTCCCCACTTCCATCCCCTCCTTCCATTGCAGAAGACCCAAATTCTTTGTCAGGGCCACTGTTATAAAGTGGAGATGTCCAAAGCAAACTATCCCTCCCGATGATACCGGTTTCCAAAAGAAACTCCTGTATCTGGAATCAATCGGTATTGACTCTTTCTCGCTTATTGAAAACCATCCAACAGTGATCACAACTTCTCTTGCTGACATAAAATCCACCGTGGAATACATTACCTCCTTGGATTTCACCGCAATTGAGTTTCGGCGTATGGTTGGCATGTGCCCTGATATTCTGACCACCCAAGTCTCAGACCTCATACCTGTCTTCACCTTCCTTCATCGCGAGGTTCATGTGCCTGGCTCGCATATTAAGCGGGTAATAAATCGCCGTCCCAGGTTGCTTGTCTGCAGTGTTAGTAAGCGACTTCGTCCTACCCTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAACAAGCACACTGACTTGCTATCATGTAGTGTTGAAGAAAAGTTCATGCCCAGGATTGATTACTTTGAGAATATCGGGTTTTCTCGCCGTGATGCAACTTCAATGTTCCGAAGATTTCCTCAGCTGTTTTGTTATAGTATTAAAAATAACTTGGAGCCTAAATACAGTTACTTTGTGGTGGAGATGGGGAGAGATCTGAAGGAGCTGAAAGAATTCCCACAGTATTTCTCATTTAGCCTAGAGAATAGGATTGAGCCTAGGCATAAACAGTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGCCTTGTTAAAAACAAGTGAAGTTAAATTTCAAAGTAGATTAGACGTATGTGTAAATTCTTCAACCCCTTTGAAAACATCCCCTCTGTGGTCTGCTGGCTGTGATGTTTATGACGTATAG 1017 0.4435 MASATTLFTPNPMFSTEHHSLSPSPTIPKSFTGLCKPFHSRVPTSIPSFHCRRPKFFVRATVIKWRCPKQTIPPDDTGFQKKLLYLESIGIDSFSLIENHPTVITTSLADIKSTVEYITSLDFTAIEFRRMVGMCPDILTTQVSDLIPVFTFLHREVHVPGSHIKRVINRRPRLLVCSVSKRLRPTLYFLQSIGIEEVNKHTDLLSCSVEEKFMPRIDYFENIGFSRRDATSMFRRFPQLFCYSIKNNLEPKYSYFVVEMGRDLKELKEFPQYFSFSLENRIEPRHKQCVEMGVCFPLPALLKTSEVKFQSRLDVCVNSSTPLKTSPLWSAGCDVYDV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01541 338 SMART mt_12 231 263 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 SMART mt_12 94 124 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 SMART mt_12 197 226 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 PANTHER CGI-12 PROTEIN-RELATED 48 323 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 Pfam mTERF 66 162 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 Pfam mTERF 163 310 IPR003690 GO:0003690|GO:0006355
Gma08g01541 338 Gene3D Transcription termination factor 3, mitochondrial 143 316 IPR038538 -
Gma08g01541 338 PANTHER OS03G0360600 PROTEIN 48 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01541 Gma-Chr8 13510018 13513709 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma08g01541 mTERF 4.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01541 K15032 - gmx:100804440 694.115