Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01523 ATGGAACCTAGACATGATGAATACCACCACCCTGGGTCACAGTCAGTGATGCAGGACCATATGGATGGCACACATGCCGGTAGAAGACCAGCTGACCTCAATACATCAGAAGTTAAACCTGTACTTAATTACTCCATACAGACAGGTGAAGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATATCAGGAAGCCTGTATTATCAAATGTCAGTGATTCCAATTATACCCCAGGTTATATGGAATTGAAAGGCATTTTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCTGATATTTCTATGCTCTCAATGGTTGACAAATATCCAAAAGAATTTGATAGAATGAATACATCATTACCTGGAGACAGAAGCAACTATGGGTCGATTCGATCAATGCCAAGAACTTCATTGAATCAGGACAATAGACAATTTGTGCCTGGCTATGGCTCTTTTGGAGTTTATGATAGATCAATGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTGCCACGACCATGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGCATTCTTCGAATAAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTACAAATATATAATCAGGTTCATGCAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTTTCTGTGTCCTCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTTCTAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCCATGAGTGATTTGGAGGATGCTCAGTTTGGTCTCAGCAGCATTGGTGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGAATCAAGAAAAAACACAACCATGTTTGGTGTCAGTTTTTCTGCAAATGATATAAATGAATTGGACAGGCAAATTAGTATTGACAGGGAGACTAGTAGAGTTGGTGTAGAATCTATTGCACAAGGTGCTCCCCTGACTAACAATTTTAACTCATCATTGGCTACTCAGTCTTCACCACCAGTGCTACCAACTTCCTCAAATTCTTATGATGCGTATCCACAGTTTTATGGTGATCAAATGATACGCCGTGGGGAACCTAGTGATCAATATATTATTAATCATGGCCTTATTCCTTCTCATAAACCTGTTATTGGAGAGACTCCTATCATTATGCCTCCTCATATGCTTGTTAATCAACAAGGGATTTTGAGTGAAGGCCTTCCACCTCATGGAATACAAGTACAAAATTCAGAAATAGCAGGAACATTTGCAAGCAATCTGGTTGATAGTTCAATTCAACAAGGAAGTGACCCTGGGAAAATTTTTGCCTCAGAATTACCATCAACAGCTCCTGCACAACTGCTTAATAATGGTTACATGAAAAATAATTTTCCTGAAGCATCAGTTGTTGTTACTGCACCAGAGGGGCATTCGTTGCATCCAACAAAGATGGACAAGCTCCCAGATTATGAAGAGACTTCTTCTACATCTAGCAGTGCATTTGGTCCTGCTTATGTTGATTCCCACTACAATGCAGCTGACTTGAGTTCTCTTCATCCTCCTCCTCTTCCTAAAAGAGTTTACTATTCGGAGAGAATTTCACGGGAACAATTAGAGTTGTTGAATCGGTCCTCAAAATCAGATGATACAAACAGTTCTCAGTTTCATGTTTCAGATTTACTTTCTGATGTCAACCCACCAGATTCAGTTACAGAATCTGGTGACAAGTTGCATGGTGGAAATCTGCCTAATCTATCTGAGGAATTAGGCATCACAGGGAAGCCCTTGCATGCAGATGGCTATGCCATTGATAATGGGGCTGTCAATCATCAAATATACAAACAGCTGCCTGATGCAAGCAGTCAGATGAAATCAAAGCTAACTGAGCATGTGAGTCCTGAGTTGAAGCAGGTATCATTGGACAATGGAGGACGCAAAGATTTGTTAAATAAGGATAATGTTGTTGGGTTGGAAACAGAAATTTATAGTATAAATAACTATAACAAACCCCTGATTGATGAGACAAAAACCAGCAAACCAGACTTGCCTATTTTGCACCAGGTCTCTTCTGATAAGCACCTTGATGATCCAGCATCCATTCTTCCAGAAGTTGATTGGGGTGATACCTCTGTGAAGGAGTCTAATGAGGATATTAATGTTCAAGCCTTACCTGTTTCCATAAATGGGAATACAACTACAGATGAAGATTCTGAAGAATTTCCTTCAAATGTTGTTTCCAAACAAGCGCAAGGTGACATCCTTATTGATATTAATGATCGGTTCCCACGTGAATTTTTCACTGATATGTTCTCTAAAGCAGTACTTGAAGAAGATCCCTCTAGTCTGCATCCATTAACTTCAGATGGAGTGGGCTTAAGTGTAAACATGGAAAATCGTGAACCTAAACGATGGTCATATTTTCAAAAATTGGCTCAAGAAGGGATTGATAATGTGTCTCTTATGGACCAGGATCATCTTGATTTTTCACCAGGAAAAGTGGTTGGAGAAAATAGGGCTCAACATGTTAAACCTTTAACAACTGATGAAGTTTCTCTGAACCATGCAGAGTCCCACCTTGATTTTGTTGAAGAAAATATAAGAGACTTGCATGGAAGGATTGGAGCAGAAACCACTGTTCTAAAGTCAAATTATGATCATTCCCAAGTGAACGACACCGAAAGTATGCAATTTGATGTTATGATGGAAAACATAAGAGCACAAGAGTCAGAATATGAGGTTGGGAAGTTTGAAAAAAGGAATAGCAATCTACCTCCTCCTGATCCTTCTTTAGTAGGAGAGTTTGATCCAAGTACCTTCCAGgtcataatgaatgatgatcttgaagagctgaaggaactgggttctggtacctttgggactgtgtatcatgggaaatggcgaggaacagatgttgccattaaaagaataaagaaaatctgcttcactggtcgatcatctgagcaagagagactgACTGTAGAATTCTGGCGGGAGGCAGAAATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGATGGACCAGGAGGAACAATGGCTACTGTTGCAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTACACTTTGACTTAAAATGTGACAATTTGTTGGTGAACTTGAAAGATCCTATGCGGCCTATATGCAAGgttggggattttggcttgtcaaaaattaaacgaaataccttggtttctggtggtgtgcgagggacacttccttggatggcaccagagctgctgaatggtagcagcaacaaggtctcagaaaaggttgatgtgttctcctttggcatagtattatgggagattctaactggtgaggagccatatgccaatatgcactatggtgcaatcataggtgggattgtgaataacacattaaggccaacaatcccagatcattTTGAAGTAGATTCAGACAGTTTTTTGGAACCCAAAAGAACAAAAAAAAAAAAAAAAGACACCAGCCATGGCTCTTCCTCTGAAACCTTCTTGAGCCAAAGGCTGTATCAAGCTCAAAACAATCATCAGTCAGGGTGA 3714 0.3538 MEPRHDEYHHPGSQSVMQDHMDGTHAGRRPADLNTSEVKPVLNYSIQTGEEFALEFMRDRVNIRKPVLSNVSDSNYTPGYMELKGILGISHAGSESGSDISMLSMVDKYPKEFDRMNTSLPGDRSNYGSIRSMPRTSLNQDNRQFVPGYGSFGVYDRSMMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELMQKALQIYNQVHAIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLLDREGSQKLRMFLFSMSDLEDAQFGLSSIGDDSEIQYVVAVNGMDLESRKNTTMFGVSFSANDINELDRQISIDRETSRVGVESIAQGAPLTNNFNSSLATQSSPPVLPTSSNSYDAYPQFYGDQMIRRGEPSDQYIINHGLIPSHKPVIGETPIIMPPHMLVNQQGILSEGLPPHGIQVQNSEIAGTFASNLVDSSIQQGSDPGKIFASELPSTAPAQLLNNGYMKNNFPEASVVVTAPEGHSLHPTKMDKLPDYEETSSTSSSAFGPAYVDSHYNAADLSSLHPPPLPKRVYYSERISREQLELLNRSSKSDDTNSSQFHVSDLLSDVNPPDSVTESGDKLHGGNLPNLSEELGITGKPLHADGYAIDNGAVNHQIYKQLPDASSQMKSKLTEHVSPELKQVSLDNGGRKDLLNKDNVVGLETEIYSINNYNKPLIDETKTSKPDLPILHQVSSDKHLDDPASILPEVDWGDTSVKESNEDINVQALPVSINGNTTTDEDSEEFPSNVVSKQAQGDILIDINDRFPREFFTDMFSKAVLEEDPSSLHPLTSDGVGLSVNMENREPKRWSYFQKLAQEGIDNVSLMDQDHLDFSPGKVVGENRAQHVKPLTTDEVSLNHAESHLDFVEENIRDLHGRIGAETTVLKSNYDHSQVNDTESMQFDVMMENIRAQESEYEVGKFEKRNSNLPPPDPSLVGEFDPSTFQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREAEILSKLHHPNVVAFYGVVQDGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPDHFEVDSDSFLEPKRTKKKKKDTSHGSSSETFLSQRLYQAQNNHQSG 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01523 1237 Coils Coil 864 884 - -
Gma08g01523 1237 MobiDBLite consensus disorder prediction 1 32 - -
Gma08g01523 1237 Gene3D - 179 262 - -
Gma08g01523 1237 ProSiteProfiles Protein kinase domain profile. 959 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01523 1237 CDD PB1_UP2 164 260 - -
Gma08g01523 1237 Pfam Protein tyrosine and serine/threonine kinase 960 1192 IPR001245 GO:0004672|GO:0006468
Gma08g01523 1237 Gene3D Phosphorylase Kinase; domain 1 952 1046 - -
Gma08g01523 1237 CDD STKc_MAP3K-like 965 1192 - -
Gma08g01523 1237 MobiDBLite consensus disorder prediction 556 581 - -
Gma08g01523 1237 MobiDBLite consensus disorder prediction 487 512 - -
Gma08g01523 1237 Gene3D Transferase(Phosphotransferase) domain 1 1047 1220 - -
Gma08g01523 1237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1084 1096 IPR008271 GO:0004672|GO:0006468
Gma08g01523 1237 SUPERFAMILY CAD & PB1 domains 177 265 - -
Gma08g01523 1237 Pfam PB1 domain 177 260 IPR000270 GO:0005515
Gma08g01523 1237 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 74 1194 - -
Gma08g01523 1237 MobiDBLite consensus disorder prediction 1217 1237 - -
Gma08g01523 1237 MobiDBLite consensus disorder prediction 554 594 - -
Gma08g01523 1237 ProSitePatterns Protein kinases ATP-binding region signature. 965 990 IPR017441 GO:0005524
Gma08g01523 1237 PANTHER SERINE-THREONINE PROTEIN KINASE 74 1194 - -
Gma08g01523 1237 SUPERFAMILY Protein kinase-like (PK-like) 946 1195 IPR011009 -
Gma08g01523 1237 SMART serkin_6 959 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01523 1237 SMART PB1_new 175 262 IPR000270 GO:0005515
Gma08g01523 1237 MobiDBLite consensus disorder prediction 1196 1237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01523 Gma-Chr8 13356161 13366636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01523 14 570 MAP Kinase Kinase Kinase AT1G16270 38.328 1.91e-89 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma08g01523 PK_Tyr_Ser-Thr 4.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01523 - - gmx:100799639 2390.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02487 15 52411260 52421921 Gma08g01523 08 13356161 13366636 GST