Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01521 ATGGATAAATCAGAGCAGACTCAACAGCAGCAGCAGCAACAACAGCATGTGATGGGAGTTGCCGCAGGGGCTAGCCAAATGGCCTATTCTTCTCACTACCCGACTGCTTCCATGGTGGCTTCTGGCACGCCCGCTGTAACTGCTCCTTCCCCAACTCAGGCTCCAGCTGCCTTCTCTAGTTCTGCTCACCAGCTTGCATACCAGCAAGCACAGCATTTCCACCACCAACagcagcaacaccaacaacagcagcttcaaatgttctggtcaaaccaaatgcaagaaattgagcaaacaattgactttaaaaaccatagccttcctcttgcTCGGATAAAAAAGATAATGAAAGCTGATGAAGATGTCCGGATGATTTCAGCAGAAGCTCCGGTCATATTTGCAAAAGCTTGTGAAATGTTCATATTAGAGTTGACGTTGCGATCTTGGATCCACACAGAAGAGAACAAGAGGAGAACTCTACAAAAGAATGATATAGCAGCTGCTATTTCGAGAAACGATGTTTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAGTTGAAAGAGGAAGGACTTGGAATAACCAAGGCTACTATTCCCAGCCTCGACCTCCTGTGGCGTTCATGCCATGGCCTCATACACAACCCCTGCAACAGCAGCCACCCCAACATCAACAAACAGACTCATGATGACTATGCAATTCAATTAGATAGCCTTGCATGA 723 0.4011 MDKSEQTQQQQQQQQHVMGVAAGASQMAYSSHYPTASMVASGTPAVTAPSPTQAPAAFSSSAHQLAYQQAQHFHHQQQQHQQQQLQMFWSNQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGITKATIPSLDLLWRSCHGLIHNPCNSSHPNINKQTHDDYAIQLDSLA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01521 240 Pfam Core histone H2A/H2B/H3/H4 66 169 IPR007125 GO:0003677
Gma08g01521 240 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 9 200 - -
Gma08g01521 240 Gene3D Histone, subunit A 67 184 IPR009072 GO:0046982
Gma08g01521 240 MobiDBLite consensus disorder prediction 42 61 - -
Gma08g01521 240 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 9 200 - -
Gma08g01521 240 SUPERFAMILY Histone-fold 63 178 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01521 Gma-Chr8 13341908 13343431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01521 1 202 CCAAT-HAP5 Transcription Factor Family AT1G56170 68.812 5.72e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma08g01521 CBFD_NFYB_HMF 1.9e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01521 K08066 - gmx:100796987 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02489 15 52442049 52442855 Gma08g01521 08 13341908 13343431 GST