Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01513 ATGGCGGAGAGTGGCGGAGGAAATCGCCGGAGAGAACCGCTTCTGGTGTCGCCGGAGGAAGAGGCTGCAAAAGCATCGTGGAGGCTTAACGTCAAAGAGTTTCGTTTGCCAAGCCAAACGAATGATCATCAAAATCAACGATCCTTCACTTTCCATGGCCTTCTTCGTAAACCCAGGAAGCAACGCAAAGTGGCAGAATATTACAAGAATCAGGAGAGACTCCTTGAAGGATTTAATGAGATGGAGACTATGACTGAAGAGGGTGGTTTCCCAGGATCTCTAACTGAGGATGAAATGAAGCAACTAGCCAAGAGTGAGAGGATGGCTGTTCATGTGTCAAATATGTGTAACTTGGTGCTGTTTGCAGCAAAGGTTTATGCCTCAGTTGCAAGCAGATCATTAGCAGTCATTGCCTCAACCATGGATTCTCTCTTGGATCTCTTGTCAGGATTCATATTGTGGTTTACTTCTAATGCCATGAAAAACCCAAATCAATATCACTATCCAATTGGAAAGAAACGCATGCAACCAGTGggtatcattgtttttgcatcagtgatggcaaccttggggttgcagattttgattgaatctgcccgagaacttatttccaagTCTAAGCCTGATATGGATCCAACAAAACTGCATTGGATGATCGGAATTATGGTGTTTGTGACTGTAGTGAAGTTCATTCTTATGGTCTACTGTCGAAGATTCAAAAATGAAATTGTTAGAGCATATGCACAAGATCACTTTTTTGATGTCATTACTAATTCTGTTGGATTAGCTGCTGCTGTGCTAGCTGTCAAGTTCTGCTGGTGGATTGATCCAACAGGAGCTATTATTATAGCATTGTATACAATTAATACATGGGCCAAGACAGTCATTGAGAATGTTTGGTCACTTATTGGAAGGACAGCACCACCTGATTTTCTAGCCAAGTTAACGTTCCTCATATGGAATCACCATGAACAGATCAAGCACATAGATACTGTTAGAGCTTACACCTTTGGTGCACATTACTTTGTGGAAGTTGACATTGTGTTGCCGGAAGACATGCTTCTCCACCAAGCACACAACATTGGTGAGACACTCCAAGAGAAGCTGGAGCAGCTTCCAGAAGTCGAAAGGGCTTTTGTGCACGTAGATTTTGAGTCCACTCACAGGCCAGAGCACAAGACCATGGTGTGA 1191 0.4047 MAESGGGNRRREPLLVSPEEEAAKASWRLNVKEFRLPSQTNDHQNQRSFTFHGLLRKPRKQRKVAEYYKNQERLLEGFNEMETMTEEGGFPGSLTEDEMKQLAKSERMAVHVSNMCNLVLFAAKVYASVASRSLAVIASTMDSLLDLLSGFILWFTSNAMKNPNQYHYPIGKKRMQPVGIIVFASVMATLGLQILIESARELISKSKPDMDPTKLHWMIGIMVFVTVVKFILMVYCRRFKNEIVRAYAQDHFFDVITNSVGLAAAVLAVKFCWWIDPTGAIIIALYTINTWAKTVIENVWSLIGRTAPPDFLAKLTFLIWNHHEQIKHIDTVRAYTFGAHYFVEVDIVLPEDMLLHQAHNIGETLQEKLEQLPEVERAFVHVDFESTHRPEHKTMV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01513 396 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 383 IPR036837 -
Gma08g01513 396 SUPERFAMILY Cation efflux protein transmembrane domain-like 105 304 IPR027469 -
Gma08g01513 396 TIGRFAM CDF: cation diffusion facilitator family transporter 109 383 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gma08g01513 396 Pfam Dimerisation domain of Zinc Transporter 310 383 IPR027470 -
Gma08g01513 396 Pfam Cation efflux family 113 302 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gma08g01513 396 Gene3D Cation efflux protein transmembrane domain 107 302 IPR027469 -
Gma08g01513 396 Gene3D Cation efflux protein, cytoplasmic domain 309 384 IPR036837 -
Gma08g01513 396 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g01513 396 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 19 396 - -
Gma08g01513 396 PANTHER METAL TOLERANCE PROTEIN 9 19 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01513 Gma-Chr8 13254211 13258567 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01513 - - gmx:100797536 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01513 08 13254211 13258567 Gma08g01513 08 13254211 13258567 ECH
Gma15g02497 15 52564513 52567915 Gma08g01513 08 13254211 13258567 GST