Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01505 ATGGATTTCACTCCGCCGCCGATCGAGGACGGTTTCACCGCCGAGAAACTCTTCACGCAGGGCTTCTCCTACACATACGATGACGTCATCTTTCTCCCCCACTACATCGACTTCGCTGCCGACGTCGTGGACCTCTCCACGCGCCTCACGCGCCGCCTTCCCCTTGCCGTGCCGTTTGTTGCCTCTCCGATGGACACCGTGTCGGAGtccgccatggcctccgccatggcctccCTCGGCGGCATCGCCGTCGTCCACTCCAACGTCCCCGCCGCCGTCCAGGCGGCCATCCTCCGCAAAGCGAAGTCCCGCCGCGTCCCCATCCTCTCCGACCCCGCCTTCGCCGCACCTTCCGCCGTCGTGGAGCACGATGACGCCTTCGGGGCCTCCCCCTTCCTTCTCGTCACCGACACTGGCACCTCCGCCGGGAAACTCCTCGGCTACGTCGCGAAGAGTGACTGGACGAATCATACCGACAAGGGCTTGAGAGTCGGCGACTACATGGCGCCGCCTCCCAAGCCAGTGCCATGGAACGCCGACCTAAACAAAATTAATGAAATATTTGAGAGTGAGAAAAGTGGTGCTGTGGCTTTGGAGAAGGATGGTGAGGTTGTTGATTTGGTGGTGAGGGAGGAGGTGGAGAGGGTGAAGGGTTACCCGAAACTGGTGGCGCCGGCGACGGTGGGGGCGGACGGGGAGTTTATGGTGGGGGCCGCGGTGGGGACGAGGGAAGATGATAAGGAGAGGTTGGAGCATTTGGTGAAGGCTGGGTTGAATGTTGTAGTGTTGGATAGTTCTCAGGGGAACTCAATTTATCAGTTAGAGATGGTGAAGTATGTGAAGAGGGTTTACCCTGAGCTTGATGTGATTGGGGGGAATGTTGTGACTATGCACCAGGCTGAGAATCTGATTCAGGCTGGGGTTGATGGGTTGAGGGTTGGAATGGGGTCTGGGTCCATTTGTACTACTCAGGAGGTTTGTGCTGTGGGGCGTGGTCAGGCAACTGCTGTTTACAAGGTCTCGTCCATTGCTTATAAAAGTGGTGTTCCTGTGATTGCTGATGGTGGCATCTCAAACTCTGGTCATATTGTTAAGGCTTTGTCATTGGGAGCGTCAACTGTTATGATGGGAAGCTTCTTAGCTGGTAGTCTTGAGGCTCCTGGGGCTTATGTGTATCAGAATGGTCAACGTGTGAAAAAGTACAGAGGAATGGGTTCCCTAGAAGCCATGACTAAAGGGAGCGATGCAAGGTACTTGGGTGATACAGCAAAGCTAAAAATTGCTCAGGGGGTTGTTGGAGCTGTTAAAGATAAGGGCTCTGTCTTGAATTTCATACCATACACCTTGCAAGCAGTCAGGCAAGGGTTTCAGGATATCGGTGCCAACTCTCTACAGTCTGCTCATGACCTTCTAAGATCCAGGGTGTTAAGACTGGAGGTCCGGAGTGGAGCAGCACAAGTTGAAGGTGGAATTCATGGGCTGGTTTCTTATGAAAAGAAATACTTTTGA 1509 0.5321 MDFTPPPIEDGFTAEKLFTQGFSYTYDDVIFLPHYIDFAADVVDLSTRLTRRLPLAVPFVASPMDTVSESAMASAMASLGGIAVVHSNVPAAVQAAILRKAKSRRVPILSDPAFAAPSAVVEHDDAFGASPFLLVTDTGTSAGKLLGYVAKSDWTNHTDKGLRVGDYMAPPPKPVPWNADLNKINEIFESEKSGAVALEKDGEVVDLVVREEVERVKGYPKLVAPATVGADGEFMVGAAVGTREDDKERLEHLVKAGLNVVVLDSSQGNSIYQLEMVKYVKRVYPELDVIGGNVVTMHQAENLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAYKSGVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSLEAPGAYVYQNGQRVKKYRGMGSLEAMTKGSDARYLGDTAKLKIAQGVVGAVKDKGSVLNFIPYTLQAVRQGFQDIGANSLQSAHDLLRSRVLRLEVRSGAAQVEGGIHGLVSYEKKYF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01505 502 SMART IMPDH_2 22 492 - -
Gma08g01505 502 SUPERFAMILY CBS-domain pair 132 215 IPR046342 -
Gma08g01505 502 Pfam IMP dehydrogenase / GMP reductase domain 24 492 IPR001093 GO:0003824
Gma08g01505 502 PIRSF IMPDH 11 502 IPR005990 GO:0003938|GO:0006164
Gma08g01505 502 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 23 500 IPR005990 GO:0003938|GO:0006164
Gma08g01505 502 CDD CBS_pair_IMPDH 110 210 - -
Gma08g01505 502 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 7 502 IPR005990 GO:0003938|GO:0006164
Gma08g01505 502 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 311 323 IPR015875 GO:0016491
Gma08g01505 502 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 12 501 - -
Gma08g01505 502 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 23 468 IPR005990 GO:0003938|GO:0006164
Gma08g01505 502 CDD IMPDH 23 472 IPR001093 GO:0003824
Gma08g01505 502 Gene3D Aldolase class I 11 502 IPR013785 -
Gma08g01505 502 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 7 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01505 Gma-Chr8 13192194 13196179 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01505 K00088 - gmx:547628 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01505 08 13192194 13196179 Gma08g01505 08 13192194 13196179 ECH
Gma15g02502 15 52664679 52668364 Gma08g01505 08 13192194 13196179 GST