Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01486 ATGCCTCTCTTCCTCTCCGACGAGGAGTTCGCGTGGTGCTCCGGTGACGGCTCTGCCGTGGCCGCGAAGGCCGACGCCTTCATCCGCGGCCTCTTCAACGAGCTCGACACCGTCCGCTCCAAGGCCCACGCCGCCGACATCAACGCCGAGCAGAACTGCCTTCTCATCGAGCAGAAGTATCTCTCCCTCACCGCCGAGTTCTCCAAACTCGAGTCGAACATCGCCGAACTTCAATCCTCTCTCGATCAGCGCCTCCGCGAAATCGACGAGGTGCAATCGCAGAACCACCGAATCAAATTGGAAGCGGTTGAGAAAGATAGGGAGATAGAGCGGTTGAGGACGGAGGTGGCGGAGTTGCACAAGTCGAAGAGGCAGTTGCTTGAGTTGAACGAGCAGAAGGATTTGGAGCTAAGTGAGAAGAATGCAACCATGAAGAGTTATCTTGATAAGATTGTTCGTTTAAGTGAAAATGCTGCTCATAAGGAGGCACGGTTGAGTGAAGTTGAGGCAGAATTGGCACTGTGCCGGGCTGCTTGCACTCGCTTTGAACAGCAGGAGAAGGAGATTGTTGAGAGGCAGAATTCGTGGCTCAACGAGGAGTTGAATGCTAAAGTTAACATTGTTTTTGAGCTGCGCAGAAAGCACACTGAATTTGAAGCTGATATGACCTCCAAACTTGCAGATATGCAGAGGCAGTTTGGTGAAAGTTCTAAATCTCTACTGTGGAATGAGGATAGAGTGAGGGAGCTTGAAATTAAGCTTAAATCTGTGCAGGAGGAATTAATTTCTGCTAAAGATGTTGCTGCAGCGAACGAAGAACAATTATCTGCTGAACTTTCCACTGTTAATAAGCTTAATGAGCTATATAAAGAGAGTTCCGAGGAATGGTCAAAAAAAGCAGCAGACCTAGAGGGTGTGATAAAAGCAATAGAGTCACGCCTAAAGCAAGTTGAAGATGATTATAAAGAGAAACTTGAGAAGGAATTATCTGCCAGAAAACAAGTTGAAAAGGAGGCCACTGATTTAAAAGAAAAGCTTGAGAAGTGTGAAGCTGAAATTGAGACAAGGAAGAAGACTGATGGAGTGAATAATCTTCCTCTTAGCAGTTTTGCTACTGAACCGTGGATGGAACCAATTGAAGCTGATACCATGGTTGAGGAAAATAGCTTGCTACTAGTCCCAAGAATTCCTGTTGGAGTTTCTGGAACTGCATTGGCTGCTTCACTTCTGCGAGATGGGTGGAGTTTGGCCAAAATGTATGCAAAATATCAAGAGGCAATTGATGCATTGAGGCACGAACAATTGGGAAGGAAGGAGTCAGAAGCAGTACTGCAACGGGTTCTATACGAGTTAGAGGAGAAAGCGGAAGCAATTATAGATGAAAGAGTGGAACATGAAAAAATGGCTGACTCATACTCCTTGATGAACCAAAAATTGCGAAAATCCCTGAATGAAAATTCCAACTTAGAGAAAACCATCCAGGAACTGAAGGCTGATCTGAAAAGGCATGAACGGGATTATAATCTTGTCCAGAAAGAAACTGATGACCTTCGAAAACAGGTGACAGTACTTCTGAAGGAATGCCGAGACATACAACTTCGTTGTGGCTCAATGGGATATGATATTGTTGATGATGCTTCAAATATTGTTTCAAGGACAAGTACAGAGACTGAAGCTGAACATGTCATATCCGAGCACCTCTTGACCTTCAAGGACATCAACGGACTAGTTGAGCAGAATGTTCAACTTAGAAGCCTTGTACGTAGCATTTCTGGCCATATTGAAAATCAGGAGGTGGAATTCAAGGAGAAGCTTGAAATGGAACTCAAAAAGCATACTGAAGAATCTGCTTCAAAAGTTGCAGCTGTTCTGCAGAGAGCAGAAGAGCAAGGCCACATGATTGAAGCGCTTCATGCATCTGTTGCGATGTATAAGAGGTTATATGAGGAGGAGCATAATCTTCATTTATCTCATACCCATTCCTCAGAAGCTCTTGCAGCTGTTGCGGAAGTTGGAAGAAACAACCTTAAGACTTCAATTGAAAGTTCACAGGAGGCTGCTAAGAAGTCCCTTGAAAAAGCTGCTGAGCGTGTGAGATGCCTTGAGGATGATTTAGCGAAGTCTAGGAGTGAGATTATTGTATTACGATCAGAACGTGACAAGAGTGCACTTGAAGCAAATTTTGCTAGAGAGAAACTTAATGACATTATGAAAGAATTTGAACATCAGAAAACTGAAGCCAAAGGCATTTTAGAAAGAAATGTTGAGTTTTCTCAGCTGGTTGTTGACTACCAACGAAAATTGCGTGAAAGCTCTGAGTCATTGATTGCTGCTGAGGAGCTTTCGCGGAAACTTACTTTGGAGCTGTCAGTTTTAAAGCAAGAAAAGGAAGTCATATCAAATTCTGAAAAAAGAGCATCCAATGAAGTTCGCAGTTTGTCTGAAAGGGTGCAGCGTTTGCAGGCTAGTTTGAGTACCATACAGAGTACTGAGGAAGTTCGAGGGGAAGCAAGAGCTGCAGAGAGGGTTAAGCAAGAAGAATATATAAAGAAATTGGAGAGGGAATGGGCTGAGGCCAAGCAAGAGTTAAATGAAGAGCGGGAAAATGTGCGGAGATTCACATCAGATCGGGACCAGACCCTAAAAAATTCTCTGAGACAGGTTGAGGATATGAGCAAAGAGTTAGCTAATGCATTGCGTGCAGTTGCATCTGCTGAATCAAGGGCTGCTGTGGCTGAGGTAAAACTCTCTGGTCTTCAAAGAAAGATGGGTTCCACGGATGACAAGCTTGTCGAAATAGGTGGAGTGAGTGGACCTTCCACTTTATCAAGTGATGAGGTTGTTGCTGAATTGCAAAAGGCAAAGGACGAAATTGAAAAGTGGAAAGAGGAAGCTCATGCCAACAAAGCCCACATGCTGCAGTATAAGAGCATTGCTGAGGTGAATGAAGATGCACTGAAAGAGATAGAAAAGGCGCATGAGAAGTTTAAAATAGAGGCTGACAATGGAAAGAAAGATCTGGAATCTGAACTTAAGTCACTAAGAGACAAGATGTTAGAGCTTGAAAATAAATCTTCTTTGAAATATGAAGAAGTTGCTTCTGAAACTGTGGGAAAGGAAGAGGCTCTTACATCTGCTATGGCTGAAATCACAAATCTTAAAGAAGAAATTTTAACCAAATCTTCTCAAATTTCTGCAATGGAAATTCAGATCTCGGGTTTAAAAGAAAAACTGGACAGGGAACATCAGAAATGGCGGGCAGCTCAAACCAATTATGAAAGACAGGTTGTTCTCCAGTCCGAAACTATTCAGGAGTTGACAAAAACATCTGAAGCACTAGCCTTGCTGCAGGAGGAGGCATCTGAGTTACGGAAACTAGCCAATACTCAGAAAATTGAAAATAATGAACTAAAGGCTAAGTGGGAAGATGAGAAGGTACAACTAGAGAAGTCTAGGAATGATGCTGAGAAGAAATACAATGAAATCAATGAACAGAATAAAATACTACATAGTCAACTTGAGGCTTTTCATATTCAATGGGCCGAGAAGGAGCGTAACGCTGCTGGTATTTCATCTGGAAGTAGTAGTGCAGATGCCTTTGGTGATGCTGGTCTTCAAAACGTGATTAATTATCTCAGACGTTCCAAAGAAATTGCAGAAACAGAAGTTTCATTGTTAAAACAAGAGAAGCTGCGACTACAGTCACAGCATGAGAGTGCTTTGAAGGCAGCAGAGTCTGCACATGCATCACTAGAAACTGAGCGTGCAAAATCAAGATCATTTTTGTTTACCGAAGAGGAGTTCAAAGCATTGCAGCTTCAGGTCAGAGAATTGAACTTACTTCGTGAGAGTAACATGCAGCTCAGGGAAGAAAATAAACACAATTTTGAGGAATGTCAGAAATTGCGTGAACTAGCACAAAAGGTTAGAGCTGAGACAGAGAACCTAGAGAATCTCCTGAGGGAAAGAGAAATTGAGCTTCAGCGCCATAAGAAAGAAATTGGAACATTAAAAATGGAAAAAGATAATCTCAATAAGAAGGTTTCTGAGTTGCTTGAAAGGAGTAAAAATGTTGATGTTGAGGATTATGATCGAGTGAAGAAACTTGCTAGAGAAATCCAGGATAAACTAAGAGAGAGAGATGCTCGGATTGAGGAACTTGGTAAAAGTCTATCAGAAAAGCAGGATTCTGTTTCATGCCTAGAGAAAGATCTTTCAAACTGCCGATTGGAGCTAGCAGAGAGAGAGAAGAGAATTAATGACATTCTGCATAATGAGGCTAACCTAAAACTTGATTCGGAGAAGCATAGGAAACTGCTGGCTCAGTTTAAGAAGAGGATTGATGTTTTGTCAAGGGAAAAGGAAGACCTAGGGAAAGAGAACCAACAACTTTCTAGGCAATTAGATGAAATTAAACAAGGGAAAAGGTCAACATGTGATACAACAGGTGAACAAGCGATGAAGGAGGAAAAGGACACAAGAATACAGATTCTGGAGAAACATCTGGAGAGACAGAGAGATGAATTAAAGAAGGAGAAGGAAGAGAGTCGTTTAGAGAGAAGTAGACGACTGAAGACTGAAAAGGCCATAAAGGACTCTTACAACAATGTTGAACAGGAGAAAATAAAATTGATTATTGAAATTGAGAGGTATAAGGAGTCTCTGAAAAGGTTATCTGATGAAGTTGAAAAGCTTAAGATTGTTATTGGCAATCTTCCTGAGGGTTCAAATGTGGTTCAACTTCTTTCTGGATCCAATGTCGATGACTTTGCTGCTCCTTACATATCTGCTGTGGAAAGTTTTGAAAAGGAAGCTCAGTCAGTATTTCGGGAGCTTGGAGGTCGCGGTAATCTTGGAGATGCAGCAACAATTACGGATGGTTCAGCCGCTGCTACAGGTTCTCTTGTACATCCTCAATCCCAAGGCATTGCATCTTTAGCGGCCCCTGGAGTTAGCGGTTTACCACCTAAAGCCACTGGAGAAAGTGAGAAAAGACTTGCATTACCCAAAGCTAGTGTTGAAACTCGTCGAACAGGTAGGAGATTGGTCAGGCCTAAACTACTAGAGAAAAGTGAGAAAAGACCTGAGGAGCTTCAAGGTGGTGACACAGAAATGTCTGATGCTGAAGGACCTGGGGGCAAGCCTGGGCAGTCTAGTGACACAGATACTAGTAATGTTGTTCAATCATCTCAACAATTGGCTCGTAAGCGTGTTGCTCCTACCTCCACTTCTGAATTACGTGAAGAATCAGTTGCACCTGGTGAGAAGAGCTCTGATGTCTTGAAGAAGTCAAAAGGATCTGAGTCCCTAGAAGAGAATACAGAAGAACAACCTGCTGCAATTCTAGAATTTACTGGCAGCCACCCTGTCACTGAAGAATTATTTGATAGCAGTGACATGCCCCAATGCCAAAATGAGGAGGTTGGTGAAGCTCAAAATGAAGATGGTGAAATTGCTGTCGGGAATGATGAGGAATCCAAAGATCCACGGCACTTGGATGGTACTGGTCAAGAGGAATTACAAGCTGACAAAACTGGAACTTTAGAAGAGAATCAAGATCAATCTGCTGAAACAAAAGTGCTGTCTGATGAGATGCAGAGGAATCAGACAGACCCAGACAATCAGCAGTCAACATTGGCGCCCAGTGGTGAGAGAGAAGAGGGAGAATTGATGCCAGATACTGGAGATCTAGAGGGTGCTAGTGATTTGTCTAACATTGCGGAAAACCAAGAATCTCGGGAAGGTCAATCTGAGTCTGCTGCAACTCCTGAACGTTCCCCAGCTAGGGTTGATGATGATGCTCTAGAGGCTGGTGAGATTAATTCTCCTGAGCTTTCAAGTGATGATAAGAATGATGAGGGTGACTTGGTAGAGGAGGCTGCTGATGGTTCTGACAAGTTGATTGATGTCAACGAACCAATATCAGCTGAGAGCGATCAAGTGGCTGAGCCTGTTGCGAGTGAGACTGCTACTTCGACAAGCACTGTTGCAGAGAGTAGCTCCTCTAAAGTGAACTTACCTGTTCCAAGGCAAGGGACCCCTAGTGCCCCCGCTGAAACAGAAGAGACAAAGCAGGCATCACCTGTTGGTAGTACTTCAACAACCATAAATTTATCAGAGCGAGCACGGGAAAGGGCTCAAATGAGACAGGCTGGGTTGGTTTCTTCTACCCTTAGAGGTCGTGGAAGAGGCGGTGCTCCCCGTGGTCGAGTTGGTCGAGGTAGGGGAGTAGTACGCCGACCACCTCCACCACCTGGCAGTGATCAATGA 6270 0.4348 MPLFLSDEEFAWCSGDGSAVAAKADAFIRGLFNELDTVRSKAHAADINAEQNCLLIEQKYLSLTAEFSKLESNIAELQSSLDQRLREIDEVQSQNHRIKLEAVEKDREIERLRTEVAELHKSKRQLLELNEQKDLELSEKNATMKSYLDKIVRLSENAAHKEARLSEVEAELALCRAACTRFEQQEKEIVERQNSWLNEELNAKVNIVFELRRKHTEFEADMTSKLADMQRQFGESSKSLLWNEDRVRELEIKLKSVQEELISAKDVAAANEEQLSAELSTVNKLNELYKESSEEWSKKAADLEGVIKAIESRLKQVEDDYKEKLEKELSARKQVEKEATDLKEKLEKCEAEIETRKKTDGVNNLPLSSFATEPWMEPIEADTMVEENSLLLVPRIPVGVSGTALAASLLRDGWSLAKMYAKYQEAIDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDERVEHEKMADSYSLMNQKLRKSLNENSNLEKTIQELKADLKRHERDYNLVQKETDDLRKQVTVLLKECRDIQLRCGSMGYDIVDDASNIVSRTSTETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSISGHIENQEVEFKEKLEMELKKHTEESASKVAAVLQRAEEQGHMIEALHASVAMYKRLYEEEHNLHLSHTHSSEALAAVAEVGRNNLKTSIESSQEAAKKSLEKAAERVRCLEDDLAKSRSEIIVLRSERDKSALEANFAREKLNDIMKEFEHQKTEAKGILERNVEFSQLVVDYQRKLRESSESLIAAEELSRKLTLELSVLKQEKEVISNSEKRASNEVRSLSERVQRLQASLSTIQSTEEVRGEARAAERVKQEEYIKKLEREWAEAKQELNEERENVRRFTSDRDQTLKNSLRQVEDMSKELANALRAVASAESRAAVAEVKLSGLQRKMGSTDDKLVEIGGVSGPSTLSSDEVVAELQKAKDEIEKWKEEAHANKAHMLQYKSIAEVNEDALKEIEKAHEKFKIEADNGKKDLESELKSLRDKMLELENKSSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISAMEIQISGLKEKLDREHQKWRAAQTNYERQVVLQSETIQELTKTSEALALLQEEASELRKLANTQKIENNELKAKWEDEKVQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIQWAEKERNAAGISSGSSSADAFGDAGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQHESALKAAESAHASLETERAKSRSFLFTEEEFKALQLQVRELNLLRESNMQLREENKHNFEECQKLRELAQKVRAETENLENLLREREIELQRHKKEIGTLKMEKDNLNKKVSELLERSKNVDVEDYDRVKKLAREIQDKLRERDARIEELGKSLSEKQDSVSCLEKDLSNCRLELAEREKRINDILHNEANLKLDSEKHRKLLAQFKKRIDVLSREKEDLGKENQQLSRQLDEIKQGKRSTCDTTGEQAMKEEKDTRIQILEKHLERQRDELKKEKEESRLERSRRLKTEKAIKDSYNNVEQEKIKLIIEIERYKESLKRLSDEVEKLKIVIGNLPEGSNVVQLLSGSNVDDFAAPYISAVESFEKEAQSVFRELGGRGNLGDAATITDGSAAATGSLVHPQSQGIASLAAPGVSGLPPKATGESEKRLALPKASVETRRTGRRLVRPKLLEKSEKRPEELQGGDTEMSDAEGPGGKPGQSSDTDTSNVVQSSQQLARKRVAPTSTSELREESVAPGEKSSDVLKKSKGSESLEENTEEQPAAILEFTGSHPVTEELFDSSDMPQCQNEEVGEAQNEDGEIAVGNDEESKDPRHLDGTGQEELQADKTGTLEENQDQSAETKVLSDEMQRNQTDPDNQQSTLAPSGEREEGELMPDTGDLEGASDLSNIAENQESREGQSESAATPERSPARVDDDALEAGEINSPELSSDDKNDEGDLVEEAADGSDKLIDVNEPISAESDQVAEPVASETATSTSTVAESSSSKVNLPVPRQGTPSAPAETEETKQASPVGSTSTTINLSERARERAQMRQAGLVSSTLRGRGRGGAPRGRVGRGRGVVRRPPPPPGSDQ 2089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01486 2089 Pfam TPR/MLP1/MLP2-like protein 1049 1175 IPR012929 GO:0006606
Gma08g01486 2089 Coils Coil 60 132 - -
Gma08g01486 2089 Coils Coil 151 171 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1749 1772 - -
Gma08g01486 2089 Coils Coil 803 830 - -
Gma08g01486 2089 Coils Coil 1064 1095 - -
Gma08g01486 2089 Coils Coil 1534 1568 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1982 2009 - -
Gma08g01486 2089 Coils Coil 300 359 - -
Gma08g01486 2089 Coils Coil 775 795 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1847 1882 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1903 1923 - -
Gma08g01486 2089 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2065 - -
Gma08g01486 2089 Coils Coil 472 520 - -
Gma08g01486 2089 Coils Coil 1106 1172 - -
Gma08g01486 2089 Coils Coil 1398 1418 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1820 1846 - -
Gma08g01486 2089 Coils Coil 684 711 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 2016 2041 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1716 1748 - -
Gma08g01486 2089 PANTHER NUCLEOPROTEIN TPR 1 2065 - -
Gma08g01486 2089 Coils Coil 881 922 - -
Gma08g01486 2089 Coils Coil 842 876 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1647 2089 - -
Gma08g01486 2089 Coils Coil 975 1024 - -
Gma08g01486 2089 Coils Coil 247 274 - -
Gma08g01486 2089 MobiDBLite consensus disorder prediction 1663 1701 - -
Gma08g01486 2089 Coils Coil 1433 1474 - -
Gma08g01486 2089 Coils Coil 1299 1361 - -
Gma08g01486 2089 Gene3D - 251 527 - -
Gma08g01486 2089 Coils Coil 448 468 - -
Gma08g01486 2089 Coils Coil 1216 1254 - -
Gma08g01486 2089 Coils Coil 1488 1522 - -
Gma08g01486 2089 Coils Coil 1271 1291 - -
Gma08g01486 2089 Coils Coil 944 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01486 Gma-Chr8 12919103 12952353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01486 K09291 - gmx:100788022 3764.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01486 08 12919103 12952353 Gma08g01486 08 12919103 12952353 ECH
Gma15g02525 15 53015852 53052517 Gma08g01486 08 12919103 12952353 GST