Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01459 ATGTATTCAATTGCAATGGAATCACCGCAAGGCTTCCCACACTATACAAAGGAGGACCTCCACATCATGAAAAGCAGAGGCAAGAAGAAGAATAGAGCAAGAGAAATTGGAATGGAAGGCAGAGGTGGAGGAGAAGTGAGAAGGCTTCACATCATTTACTTCCTTAGTCAGATAGGTGGTCGTGCAGATCATCCTCATCTGATTCGTGTTCTTCATCTTGCTCGAAATGGGGTTTATCTAAGAGATGTAAAGAGATGGCTTGGGGAATTGAGAGGAAAAGACTTGCCAGATGCTTTTTCTTGGTCCTACAAGAGGAGGTACAAGAGTGGATATGTGTGGCAAGACTTGTTGGATGACGACCTCATAACCCCCATCTCTGACAATGAATACGTCCTCAAAGGATCACAAATCCACCCTACCCCATTTGCAACAACTCCTTCACTTGATGAAAAGAAAACTACTGTTTGTGATATCCATGCTGAGAAGAAATGTAGTCAAGTACAAACTATAGAGGACAAAAACCAGCAGCCGCCTCTAGCAGAAGAAGAACCTCGAATTCAACGAGACTTGGATTTGAAAACGGATACTCCGACAAAAGGGTCATCAGAAATCAGCCAGGACTCATCATTGGTCTTCAGCTCAGACAGGTCATCTGTGACAGATGATGACTCTTCAAAGGTCGAAGAAGAGAAGCATTTAGAGGCAACAGGCAAAGACGGCTTCAACGAAATCAACCAAGAGAAGTTAGAGGATTGCTCATTGCCTTCCTTGTATCACAATCTGTTGAGTAAGAAGGCTAGCCACAAAGATGACCTGAATAAAACCAACTCACCTGATTCATCCTCCTCCACTATATCATCATCTTCATCTCAATCCTCCTTTACTAAGATCAGGAGCAATTCTGCCAGAGTTTCTAATGTGTTCCGCAATTGGATCACTTGTGGCACTGTGGAAACAAATGATGCAGCCCTGGTCCAAATGAACCTGGCTCAAAAGAATTTATCTAAGGAACCTATCAACATACCTGAAAGAAGGGCTGAGATTTGTAAGGGAGACAAATTGGGAGGATCAGCCAGGTGTTTTGCGACTTCTTGGGGTCATCATCACCAGAAACAACAATATGGGGCAAGAAAAAGCTTTGATGGAAATGAAACTAGCAGGAGCAGGAAAAAGTTAGGGGAGTTGCTAAATCAAACTTCTTCCAAACCATTTGGTGGACCAACCTGCTCgcaatgcgggaagtcgtttaagcctgagaaaatgcacaaacacatgaagtcttgtaaaggaatgaaagccttgggaaagTCCTCCACAACTGTTGAGGAGGCACAGCTTCAGGGATCATCAGCTTCTTATACAGATTACTTTTTGACCAACTAA 1383 0.4085 MYSIAMESPQGFPHYTKEDLHIMKSRGKKKNRAREIGMEGRGGGEVRRLHIIYFLSQIGGRADHPHLIRVLHLARNGVYLRDVKRWLGELRGKDLPDAFSWSYKRRYKSGYVWQDLLDDDLITPISDNEYVLKGSQIHPTPFATTPSLDEKKTTVCDIHAEKKCSQVQTIEDKNQQPPLAEEEPRIQRDLDLKTDTPTKGSSEISQDSSLVFSSDRSSVTDDDSSKVEEEKHLEATGKDGFNEINQEKLEDCSLPSLYHNLLSKKASHKDDLNKTNSPDSSSSTISSSSSQSSFTKIRSNSARVSNVFRNWITCGTVETNDAALVQMNLAQKNLSKEPINIPERRAEICKGDKLGGSARCFATSWGHHHQKQQYGARKSFDGNETSRSRKKLGELLNQTSSKPFGGPTCSQCGKSFKPEKMHKHMKSCKGMKALGKSSTTVEEAQLQGSSASYTDYFLTN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01459 460 MobiDBLite consensus disorder prediction 197 218 - -
Gma08g01459 460 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 39 445 IPR010369 -
Gma08g01459 460 MobiDBLite consensus disorder prediction 276 296 - -
Gma08g01459 460 MobiDBLite consensus disorder prediction 176 196 - -
Gma08g01459 460 MobiDBLite consensus disorder prediction 267 296 - -
Gma08g01459 460 MobiDBLite consensus disorder prediction 219 242 - -
Gma08g01459 460 MobiDBLite consensus disorder prediction 167 242 - -
Gma08g01459 460 Pfam Protein SOSEKI, plant 50 328 IPR010369 -
Gma08g01459 460 PANTHER F3F20.2 PROTEIN 39 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01459 Gma-Chr8 12588814 12594041 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma08g01459 DUF966 9.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01459 - - gmx:100785001 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02548 15 53438250 53441110 Gma08g01459 08 12588814 12594041 GST