Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01441 ATGCCGGCTTGGTGGAATAGAAAGTGGAGCAAGAGCAAGGAGGAGCAGGAGCAGCCGGAGGAGGAGGATGAGGAGGAAGAGCCACGTGCCGCTTTTCAGCTGAATTTCATGAGCGGTGAGCGGGACAAGAACAAGGGTAGGAGTTGTAGTAAGAAGAAGACCAAGAGCTTCGACGACAAGGTCAAAGGGGTTCCGTTACCACTTCCCTCGCATAGTCTCAGCGATCCAATTCAATCATTTGGATCTGTTTCGGTGTCCGGTGGTTCCAGCATCAGCTCCTCCACCTCCTATGACGATCATCCAATTTCGCCTCCCAACACCAACAGAGGACGAGAGGAGGTGAGGTTCAATGTGAGGTCAAAAAGTCCGGGTCCTGGGTCAAGAGGACCTACCAGTCCTACCTCACCGCTTCATCAAAGGTTGCATGCTTTGAGCCTTGACTCTCCCACGGGGAGTGAGTGTCATCCATTACCTCTTCCACCTGGCTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAACGCTAGAGCAAATGGACATTTGGAAAATGCTACCAGCAATGTGTCCAAATGGAGAAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTTTATCTGGGATTCAATAGtgaaaatggacaaatgtgtgcaataaaagaagtcaaggttgtctttgatgatcacacatcgaaagagtgcctcaaacaacttaaccagGAGATAAATTTGCTAAATCAGCTTTCACACCCAAATATTGTTCAATACTATGGGAGTGAACTGGTAGAAGAATCACTTTCTGTATATTTGGAATATGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAGTATGGTCCATTTAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTGCTTATCTGCATGGAAGAAATACAGTACACAGggatattaaaggggcgaacatactagttgatcctaatggtgaaatcaaactggcagactttggaatggctaaacatataaattcttctgcctcgatgctttcattcaaaggaagtccatactggatggcacctgaggttgtaatgaatacaaatggctatagtcttccagttgatatatggagcttggggtgcacaattattgaaatggcaacatcaaaacctccctggaatcagtatgaaggggtagctgccatatttaaaattgggaacagcaaagatatgcctgaaatccccgagcatctttcgaatgatgcaaaaaaattcatcaagctatgcttacaaagagacccattagctcgcccgacagcccaaaagttactagaccaccccttcattcgagatcaatcagcaacaaaagctgcaaatgtcagcataaccagagatgctttcccttgcatgtttgatggaagccggacaccgCCTGTGTTAGAGTCCCATTCCAACCGAACAAGCATAACTTCTCTTGATGGAGATTATGCATCAAAGCCAGCTCTTGCAGCACCACGTGCATTAAGGAGTTCAAGAGATAACACAAGAATCATCACATCTTTACCAGTATCTCCCTCTTCAAGTCCATTGCGAAGATCCTCATATCCAATGACATCAAATGCCACGTTTGCTCTTGATCCTTGGCATGAAACATCTCGATACAGAGCCAATACACCACCTGAAATATACTCGGAGAAAGAAACTGAATCGCTTACGCACGCGTTAACATTACCACTTTCTTACTTACAGCACAGCACTTCTGCTAACCTTTCGTCTTCAATTTCCCTTTGGATTTCATTCATTAGATGGATTCGAAGTAGTCTTCTTCTCAGTTTCACCTCCGATGCTTTTGAAGATCTCTCCCCCACTATCGGTGTTGATTTTAAGGTCAAATATGTGATGATGGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACTGCTGGTCAGGAGAGATTCAGAACACTGACAAGTTCTTACTACAGAGGGGCACAAGGAATCATCATGGTTTATGATGTAACCCGGCGAGATACATTTACAAATCTTTCTGAAATATGGGCAAAGGAAATAGACCTTTATTCAACTAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAACTAGATAAGGACGGTGATAGAGTTGTGACAAAGAAAGAGGGAATAGACTTTGCCAGGGAATACGGTTGCCTATTTATTGAATGCAGTGCTAAAACTCGAGTTAATGTTCAGCAATGCTTTGAAGAGCTTGTTTTGAAGATTCTGGATACACCTAGCCTCATAGCCGAGGGCTCAAAGGGTGTTAAAAAGAACATTTTCAAGGACAGGCCACCCCAGTCTGATGCATCCGCAAAATATGCAAGGGTAGGAAGAGCATTGACCTTATATGAAGTTGGTGACAGAGAAGAAGCAATTGCAGAGATGGAAGACGTTTCAATATCTCTAAAAGGGTATCCAGAAATACATGCAGCTCTTGCAGCAGCCTTATATGCAGATAAGCATGCCGCTTTGCTTGCTGAAAACCAGTTTGCCATTGCAACTCTTCTTGATCCCCATTTTACAGACCTTTCATATGTTAGAGACACAAAGCACCGGCCTCCAAGTTTGATCAGTTCACTGCAGCACTTCATCACACTATCTTAA 2634 0.3459 MPAWWNRKWSKSKEEQEQPEEEDEEEEPRAAFQLNFMSGERDKNKGRSCSKKKTKSFDDKVKGVPLPLPSHSLSDPIQSFGSVSVSGGSSISSSTSYDDHPISPPNTNRGREEVRFNVRSKSPGPGSRGPTSPTSPLHQRLHALSLDSPTGSECHPLPLPPGSPTSPSSVLSNARANGHLENATSNVSKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVFDDHTSKECLKQLNQEINLLNQLSHPNIVQYYGSELVEESLSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSNDAKKFIKLCLQRDPLARPTAQKLLDHPFIRDQSATKAANVSITRDAFPCMFDGSRTPPVLESHSNRTSITSLDGDYASKPALAAPRALRSSRDNTRIITSLPVSPSSSPLRRSSYPMTSNATFALDPWHETSRYRANTPPEIYSEKETESLTHALTLPLSYLQHSTSANLSSSISLWISFIRWIRSSLLLSFTSDAFEDLSPTIGVDFKVKYVMMGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIKMLVGNKLDKDGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLIAEGSKGVKKNIFKDRPPQSDASAKYARVGRALTLYEVGDREEAIAEMEDVSISLKGYPEIHAALAAALYADKHAALLAENQFAIATLLDPHFTDLSYVRDTKHRPPSLISSLQHFITLS 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01441 877 Gene3D - 602 763 IPR027417 -
Gma08g01441 877 PRINTS Transforming protein P21 ras signature 612 628 - -
Gma08g01441 877 PRINTS Transforming protein P21 ras signature 694 707 - -
Gma08g01441 877 PRINTS Transforming protein P21 ras signature 729 751 - -
Gma08g01441 877 PRINTS Transforming protein P21 ras signature 630 652 - -
Gma08g01441 877 Pfam Protein kinase domain 191 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01441 877 SMART serkin_6 190 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01441 877 CDD STKc_MEKK1_plant 189 446 - -
Gma08g01441 877 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524
Gma08g01441 877 SMART rho_sub_3 604 754 IPR001806 GO:0003924|GO:0005525
Gma08g01441 877 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 551 - -
Gma08g01441 877 SMART rab_sub_5 603 754 - -
Gma08g01441 877 TIGRFAM small_GTP: small GTP-binding protein domain 603 746 IPR005225 GO:0005525
Gma08g01441 877 MobiDBLite consensus disorder prediction 124 141 - -
Gma08g01441 877 PANTHER MAP KINASE KINASE KINASE 1 551 - -
Gma08g01441 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 757 IPR027417 -
Gma08g01441 877 ProSiteProfiles small GTPase Ras family profile. 566 803 IPR001806 GO:0003924|GO:0005525
Gma08g01441 877 ProSiteProfiles Protein kinase domain profile. 190 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01441 877 ProSiteProfiles small GTPase Rho family profile. 580 752 - -
Gma08g01441 877 MobiDBLite consensus disorder prediction 72 103 - -
Gma08g01441 877 MobiDBLite consensus disorder prediction 1 173 - -
Gma08g01441 877 SUPERFAMILY Protein kinase-like (PK-like) 188 535 IPR011009 -
Gma08g01441 877 CDD Rab18 602 751 - -
Gma08g01441 877 SMART ras_sub_4 603 754 - -
Gma08g01441 877 Pfam Ras family 603 752 IPR001806 GO:0003924|GO:0005525
Gma08g01441 877 ProSiteProfiles small GTPase Rab1 family profile. 584 782 - -
Gma08g01441 877 Gene3D Transferase(Phosphotransferase) domain 1 187 465 - -
Gma08g01441 877 MobiDBLite consensus disorder prediction 40 60 - -
Gma08g01441 877 SMART ran_sub_2 602 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01441 Gma-Chr8 12397117 12408796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01441 108 503 MAP Kinase Kinase Kinase AT1G53570 66.265 4.25e-177 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma08g01441 Pkinase 3.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01441 K04421 - gmx:100780004 991.875