Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01432 ATGGACACCAACACTAGTACATTATTCACAAATGTGAACAGCACTTGGAATCTTGAAAAGATGGAAACAAATGAACAACAACAACAACATGATGACCATAGTATTATTCTCCAAGTTCAAGACCCTATGGGTTCTGGGATTTGGCCCATCAACAACTACCAGAACCTTCTTCAAATGCATCAAACACCCAACACAACAACCTCATCCACGGTCATAGTACCACCCTCCTCCTCATCAGGGTTCCTTGGAGACATACTAGGTGTTCATCACAACCTAGAAGAAGATGAAGAGCCAGAAGAAGAGCTAGGAGCCATGAAGGAGATGATGTACAAGATCGCTGCTATGCAACCCGTGGACATCGACCCCGCCACGATTCGAAAACCAAAGAGAAGAAATGTTCGCATCAGTGATGACCCGCAGAGCGTGGCTGCACGCCACAGGAGAGAGAGGATCAGCGAGAAAATCCGAATCCTCCAAAGACTCGTTCCCGGTGGAACCAAAATGGACACTGCTTCAATGCTCGATGAAGCCATTCGATATGTTAAGTTCTTGAAGAGACAAATCAGGTTGCTTCAATCTATTCCTCAACCTTCACGTCAACCACCACAATGCATTGGTGTTGCCAGTACTACTCCTCATGCTAGTACCTTGTTGTTAGCCCCTTCTTCTGATTGGCCTTTTGCACCAAATGTGCTACCCCGTTCCACCGCCGTCAGCGCCTCCATGGACATGTCGGCTGGACTCGGATTCGACGGCCATGCTCATGCTTGTGATGGCTCCTCCAGCTTTAACCATCATGAGGTAATCAGTGAATAA 816 0.4718 MDTNTSTLFTNVNSTWNLEKMETNEQQQQHDDHSIILQVQDPMGSGIWPINNYQNLLQMHQTPNTTTSSTVIVPPSSSSGFLGDILGVHHNLEEDEEPEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQPSRQPPQCIGVASTTPHASTLLLAPSSDWPFAPNVLPRSTAVSASMDMSAGLGFDGHAHACDGSSSFNHHEVISE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01432 271 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 252 - -
Gma08g01432 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
Gma08g01432 271 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 252 IPR045843 GO:0003700|GO:0006355
Gma08g01432 271 SMART finulus 141 190 IPR011598 GO:0046983
Gma08g01432 271 CDD bHLH_AtIND_like 136 193 - -
Gma08g01432 271 Pfam Helix-loop-helix DNA-binding domain 145 184 IPR011598 GO:0046983
Gma08g01432 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 201 IPR036638 GO:0046983
Gma08g01432 271 Gene3D - 138 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01432 Gma-Chr8 12318859 12319674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01432 104 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 83.146 1.41e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma08g01432 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01432 - - gmx:100777351 518.079