Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01430 ATGGCACTGTCCAACCGCGTCCGATCGGGAATCTCTCTCTTCACCAAATCCACGTTCCTCACTTCCGAGCGATCCACTCTCCAACGATTCCTCGTTGCCCCTTCCATTTCCTTCGCCTCCAGAAATTACGCCAACGTGCCGGGGCAAAAGGAAAACAAAGTTAAGGTCCCTCTGGCTTTGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTATATTGCATCTGTGAAAGCTAATGCAGTGGCAAAGGTTGAGTCTGAGCTTCTGCAATTTGTTGAGGCTGTAAAGAATAGTCCCATATTTTCACAGTTTATAAGGGACTTGTCTGTGGCTAAGGATGTTAGAGTAAAAGTCATCCAGGATATTTGTGGTGAAGCTAAGTTTTCAGACGTTACAAAGAACTTCCTTGTTATTGTTGCTGAGAATGGAAGGCTTAAAAACATAGACACCATTGCAAAGAGGTTTGCGCAGTTGTCAATGGCATATAAAGGAGAAGTGCAAGCAACTGTGACCACTGTTGTTCCTCTTCCCCCTGAAGAGGAAAAGGCATTGAAGGAGACTCTTCAGGAAATAATAGGTTCTGGAGCAAAGGTTCATCTTGAACAGAAGATTGATCCAAGCATACTTGGTGGTCTTGTGCTTGAATTTAGCCAGAAGGTCTTTGACATGTCAATTAAGACCAGGGCACAACAGATGGAGAGGATCCTCCGTGAGCCTAGTAGTATCATTTGCTTAACCTGTAACACTGCCGGCCACCTTTGGCCACAGCCACCAACTAGTGTCGTCATCTCACTCCGACAAATCCAATGTCGCTTCACCCTCCACCATTCGTCGTCGGATTTGCTGGCGATGCTAGCCACCTTTGGACTTCATCGCCATCTTCAATCTTCGACGTGGCCACACATGTCAAAATCACACCTCCTGTTGCAGATGAGATTATCATACTGTAGTATGAAAATTCTAAGATCTCAAACCTTCGCGTTTCAGGAGAATCTCCTCCTCCTCGTCATGGCACTTGTGACCGTTTATCAACACGAGCGTTGTACTGGTGTGTAA 1056 0.4583 MALSNRVRSGISLFTKSTFLTSERSTLQRFLVAPSISFASRNYANVPGQKENKVKVPLALFGGSGNYASALYIASVKANAVAKVESELLQFVEAVKNSPIFSQFIRDLSVAKDVRVKVIQDICGEAKFSDVTKNFLVIVAENGRLKNIDTIAKRFAQLSMAYKGEVQATVTTVVPLPPEEEKALKETLQEIIGSGAKVHLEQKIDPSILGGLVLEFSQKVFDMSIKTRAQQMERILREPSSIICLTCNTAGHLWPQPPTSVVISLRQIQCRFTLHHSSSDLLAMLATFGLHRHLQSSTWPHMSKSHLLLQMRLSYCSMKILRSQTFAFQENLLLLVMALVTVYQHERCTGV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01430 351 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 Hamap ATP synthase subunit delta [atpD]. 59 238 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Gma08g01430 351 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
Gma08g01430 351 Pfam ATP synthase delta (OSCP) subunit 65 236 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 33 238 - -
Gma08g01430 351 Gene3D - 64 156 IPR026015 -
Gma08g01430 351 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 66 236 IPR000711 GO:0015986|GO:0046933
Gma08g01430 351 PANTHER ATP SYNTHASE DELTA CHAIN 33 238 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01430 Gma-Chr8 12257769 12263004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01430 103 239 Primary Pumps ATPases AT5G13450 62.774 1.74e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01430 K02137 - gmx:100499796 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02606 15 54237998 54242647 Gma08g01430 08 12257769 12263004 GST