Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01413 ATGGCTCAGAAAACCGAGAAAGAAGAAACCGACTTCAAGGTTCCCGAAACGATTACGCTTTGCGTTAACAACTGCGGCGTCACCGGAAACCCTGCTACGAATAACATGTGTCAGAAGTGCTTCACCGCCTTCACCACCTCTACCGCCACCACGTCCGGCGCCGGAGGTGCCGGAATAGCTTCTCCGGCTACCAGATCCGGCATCTCCGCGCGTCCACTGAAGAGATCTTTTCCCGAGGAGCCCTCGCCGCCGGCGGATCCTCCGTCTTCAGACCAGACGACCCCGTCGGAGGCGAAGCGCGTGGTGAACCGCTGCTCCGGCTGCAGGAGGAAGGTCGGACTCACCGGATTTCGGTGCCGATGCGGCGAGCTCTTCTGCGCCGAGCACCGGTACTCCGACCGCCACGACTGCAGCTACGACTACAAAGCCGCCGGAAGAGAAGCCATCGCGAGGGAGAATCCGGTGATTAGAGCCGCGAAGATCGTCAAAGTCTGA 495 0.604 MAQKTEKEETDFKVPETITLCVNNCGVTGNPATNNMCQKCFTAFTTSTATTSGAGGAGIASPATRSGISARPLKRSFPEEPSPPADPPSSDQTTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVIRAAKIVKV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01413 164 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
Gma08g01413 164 Pfam AN1-like Zinc finger 105 142 IPR000058 GO:0008270
Gma08g01413 164 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 164 - -
Gma08g01413 164 Gene3D - 1 70 - -
Gma08g01413 164 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Gma08g01413 164 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Gma08g01413 164 SUPERFAMILY AN1-like Zinc finger 89 158 IPR035896 -
Gma08g01413 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Gma08g01413 164 Gene3D - 81 160 IPR035896 -
Gma08g01413 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 51 - -
Gma08g01413 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 164 - -
Gma08g01413 164 MobiDBLite consensus disorder prediction 51 98 - -
Gma08g01413 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01413 Gma-Chr8 12068868 12069362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01413 8 164 C2H2 Transcription Factor Family AT3G52800 38.690 1.15e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01413 - - gmx:100815476 295.049