Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01394 ATGGGGAAGTTATCAATCAAATTGCACGATAAGTGCAAGAACCGCAAGGAATCATCATCATGGCCATTAACAAATTGTTTTCACCACGGTGGTGGAAGAGATGATGCAATTGGAATTGCACAAGAATGTAACGTTGATTTTTCTAATCTCTTCATTGGGCGCAAGTTTTCTCAAGGTGCACATAGTCAAATTTACCATGGTGTATACAAAAAGGAACATGTTGCTGTCAAATTCGTCAAGGTACGAGATAATGATGTAAAGGGAATCCCAAAATCCCTTTTGGAGGCTCAATTTTTAAGAGAAGTCATACATCTACCTCGTCTCCACCATCAAAATGTTGTAAAGTTCATAGGCGCATACAAAGACACTGATTTTTATTACATTCTCACGGAGTATCAACAAAAGGGGTCTTTGAGGGTGTATTTGAACAAGGTAGAGTCCAAGCCAATTTCTCTGAAGAGGGTGATAGCTTTTGCTTTGGATATTGCTCGTGGAATGGAGTATATACATGCACAAGGGATCATTCATAGAGACCTTAAACCAGAGAATGTCCTTGTTGATGGGGAAATTCGCCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGCTTCGAAGTTTGATTCGTTGAGGGGTACCTACCGTTGGATGGCTCCGGAGATGATCAAAGGAAAACGCTATGGGAGAAAGGTTGATGTGTACAGTTTTGGTCTTATTTTGTGGGAGTTGTTGAGTGGAACAGTGCCATTTGAGGGCATGAATCCAATCCAGGTTGCTGTTGCTGTGGCAGATAGGAATTCAAGGCCAATTATTCCTTCACATTGCCCACATGTTTTGAGTGATTTGATAAAGCAGTGTTGGGAATTGAAAGCTGAGAAGAGGCCTGAGTTCTGGCAGATTGTTCGAGTTTTggagcaattagatcaagCCCTACTGGCTATCACTGCTTGCCACCTGAAACAGCAACAGCAAGTGACTTCAAGCACAATCTGCAATCAGCTAGCATCTCAATCCCTTAGAAAGTGGAATTGGAAGGTCGTTTTTTGGGGACAACCTCACAGTTTGAGTAAAGCAATGTATTAA 1080 0.4093 MGKLSIKLHDKCKNRKESSSWPLTNCFHHGGGRDDAIGIAQECNVDFSNLFIGRKFSQGAHSQIYHGVYKKEHVAVKFVKVRDNDVKGIPKSLLEAQFLREVIHLPRLHHQNVVKFIGAYKDTDFYYILTEYQQKGSLRVYLNKVESKPISLKRVIAFALDIARGMEYIHAQGIIHRDLKPENVLVDGEIRLKIADFGIACEASKFDSLRGTYRWMAPEMIKGKRYGRKVDVYSFGLILWELLSGTVPFEGMNPIQVAVAVADRNSRPIIPSHCPHVLSDLIKQCWELKAEKRPEFWQIVRVLEQLDQALLAITACHLKQQQQVTSSTICNQLASQSLRKWNWKVVFWGQPHSLSKAMY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01394 359 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 11 307 - -
Gma08g01394 359 Gene3D Phosphorylase Kinase; domain 1 39 134 - -
Gma08g01394 359 SUPERFAMILY Protein kinase-like (PK-like) 41 303 IPR011009 -
Gma08g01394 359 SMART serkin_6 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01394 359 Pfam Protein tyrosine and serine/threonine kinase 52 303 IPR001245 GO:0004672|GO:0006468
Gma08g01394 359 CDD STKc_MAP3K-like 52 303 - -
Gma08g01394 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Gma08g01394 359 PANTHER SERINE-THREONINE PROTEIN KINASE 11 307 - -
Gma08g01394 359 PRINTS Tyrosine kinase catalytic domain signature 230 252 IPR001245 GO:0004672|GO:0006468
Gma08g01394 359 PRINTS Tyrosine kinase catalytic domain signature 168 186 IPR001245 GO:0004672|GO:0006468
Gma08g01394 359 PRINTS Tyrosine kinase catalytic domain signature 130 143 IPR001245 GO:0004672|GO:0006468
Gma08g01394 359 PRINTS Tyrosine kinase catalytic domain signature 274 296 IPR001245 GO:0004672|GO:0006468
Gma08g01394 359 PRINTS Tyrosine kinase catalytic domain signature 211 221 IPR001245 GO:0004672|GO:0006468
Gma08g01394 359 Gene3D Transferase(Phosphotransferase) domain 1 135 346 - -
Gma08g01394 359 ProSiteProfiles Protein kinase domain profile. 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01394 Gma-Chr8 11886865 11891360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01394 5 345 MAP Kinase Kinase Kinase AT5G58950 50.000 2.56e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma08g01394 PK_Tyr_Ser-Thr 7.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01394 - - gmx:100814245 635.95