Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01380 ATGGAAAACCACCAAAACCACAAGGTAGAACCAGAACCTGACATAGAGAAGAACCATAACCACCGCCACCAACAGCAACAACACCGTAACGAAGCGTGGGGCACCTGGGAGGAGCTGTTGCTAGCGTGCGCCGTGAACCGCCATGGCTTCACGGACTGGGACGCCGTCGCCATGGAGGTCCAGTCGCGCACCACGCGCCTCCTCGCCACCGCGCGCCACTGCGAGCAGAAATTTCATGATCTCAGCCGCCGATTCGCCGTCCAATGCAACGACGACGTTCCTCCGCCGCGCCAGAACGGCGCCGCCGCCGCTATCTCTGATCACGTCCCCTGGCTCGACGAATTGCGCAAACTCCGCGTTGCCGAGCTCCGCCGCGACGTCCAACGCAGTGACGTTTCCATTCTGTCGTTGCAGTTGGAGGTGAAGAGGTTGGAGGAGGAGAAAGCGCAGGAAAAAGACTTAAAGGACGACGAGAAACCAGATCTGGCGGTTTCCGGCGAGTTGCGGCCGGAAAACGACAAAACCGGCGGAGAAGTGGAAGAGGCTGGACCGGCGAATTCCGAACCGGAGGAAAGAACCGCGAACAACACAGACAAGACGTTGCCAACCACGGGCGACGAATCAGACCGGGAGAACCAGTCGGTTAACGAGTCCAACTCGACCGGTTCGCGGTTCGAGAAAACCGGAGATGGCGACGCGAAGACCGGAACCGGACCGGATCCGGTTCATACCGGTTCGCAGGAACCGGATCCGGTCGAGCGGAAGGGAAAGCCGGTTGGAGAGGAATCGAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGCGAGTCGGTGCCTCCGAGTGAGGGGAGGAAAGTGGAGGAAGACGATGACTCATCCGAGTTACATGACTCGGTGGCTCACTCGGGCGAAGGAGGGACGCGCGAGAGCAGCGAGGTGCAGAGCTCCGCGAGCTTAATGCGTAAGAGGAAGACGCGGCGGAGGAAGGAGGTTTCCGGAGCCACTGACGCCTCGTGTCCGGCGGAGAACGACGAGGCGGCGACGGTGAAATCAGAACCGTTGGTTGGGGTTTTGGAGTTGATCAAGGGGCACGAACACAGCTCATTGTTCGAGCGCCGTCTTGATAGCCAGGATACGGATAGATACAAAGACCTAGTGAAACAGCCCATGGACTTGGAAACCATACAATTGAGACTCCAAAAGGGTCACTATTCCTCATGCACCAGTGCATTCTTCCGCGACCTCCTCCTCCTCTTCACCAACGCCACCGTGTTCTTCTCCCATGACTCCCTGGAATCGCAGGCGGGGCGGCAGCTGCACCGCCTTGCCACCGCGGAGATGAAGAACCACGGCCAAGCACAATCGGATCCTATCCCCCGGAAGAACGATTCACTCCCTCCAAATGCACCATTAGCTAAACCAGATTCTCTCCTTTCCAAGAACAAAGCCTCTGGTCCTATATTGGTTTGCCGCAAACGCAGTTCAATGTCATCCAAACCTTCCTCTGCCACCTTTGGCCAAAAGGGTGACCAACCCGTCTTCAATGACAAGAAGGAAAGGCCATCTTCTGATGCAAAGCCACCCATGAAGCCCTCTTCTTCTGATACAGACGAAGAGGAGCTTCCCAAAGCTAAGGAAAAGCCTGTTACTGGAGCAAGAAGCTTGAGGCGGAGCAACAAGAACCTCAATAGTAATAGTAGTAATAATAATAATAAGAAACCGTCCTCTATCTCCACTCCTAAGGCAGGGTCCTCGGGGAACAAGCCTTCGGAGACTGTTAAACCGGAAAAGAGCAAAGCAGAGGGGGGGGCAGACAAGAAGAGGAGTGCAGCTGCAGATTTCCTGAAACGGATTAAGCGCAACACTTCAGCGGAAGCATCGAAGGGTGGTAGTGGCGGTGGAAGCGGGGGTGGAGGAGGAGGAGGAGGAGGAAGTAGCAGCAGCAGCAAAGGTGGTGGAGGTGGTAATGGTGCCAAAGAGCAGAAGAAAATGGTGAACAATGGAAAGGGAGACAAAGGGAAAGAAAGGGCATCAAGGCATAATAACGTTGGAGGAGGTTCAGGCTCTGCGGATAAAAGGAATAATAAGAATATTGAGAACAGCTCTCAGTCAAAGAGGAGTGTTGGTAGACCTCCAAAGAAAGCAGCAGAGACAAATGCAGGTAGTGCAAAGCGTGGGAGAGAAAATAGTGCTAGTGCTGGAAAGGATAAGCGCCCCAAGAAACGTTCCAAGAAATGA 2244 0.5504 MENHQNHKVEPEPDIEKNHNHRHQQQQHRNEAWGTWEELLLACAVNRHGFTDWDAVAMEVQSRTTRLLATARHCEQKFHDLSRRFAVQCNDDVPPPRQNGAAAAISDHVPWLDELRKLRVAELRRDVQRSDVSILSLQLEVKRLEEEKAQEKDLKDDEKPDLAVSGELRPENDKTGGEVEEAGPANSEPEERTANNTDKTLPTTGDESDRENQSVNESNSTGSRFEKTGDGDAKTGTGPDPVHTGSQEPDPVERKGKPVGEESNNGSYDALAKVPTCESVPPSEGRKVEEDDDSSELHDSVAHSGEGGTRESSEVQSSASLMRKRKTRRRKEVSGATDASCPAENDEAATVKSEPLVGVLELIKGHEHSSLFERRLDSQDTDRYKDLVKQPMDLETIQLRLQKGHYSSCTSAFFRDLLLLFTNATVFFSHDSLESQAGRQLHRLATAEMKNHGQAQSDPIPRKNDSLPPNAPLAKPDSLLSKNKASGPILVCRKRSSMSSKPSSATFGQKGDQPVFNDKKERPSSDAKPPMKPSSSDTDEEELPKAKEKPVTGARSLRRSNKNLNSNSSNNNNKKPSSISTPKAGSSGNKPSETVKPEKSKAEGGADKKRSAAADFLKRIKRNTSAEASKGGSGGGSGGGGGGGGGSSSSSKGGGGGNGAKEQKKMVNNGKGDKGKERASRHNNVGGGSGSADKRNNKNIENSSQSKRSVGRPPKKAAETNAGSAKRGRENSASAGKDKRPKKRSKK 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01380 747 MobiDBLite consensus disorder prediction 306 320 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 283 305 - -
Gma08g01380 747 SMART bromo_6 130 454 IPR001487 GO:0005515
Gma08g01380 747 PANTHER BNAC04G22430D PROTEIN 15 747 - -
Gma08g01380 747 ProSiteProfiles Bromodomain profile. 364 435 IPR001487 GO:0005515
Gma08g01380 747 SUPERFAMILY Homeodomain-like 28 65 IPR009057 -
Gma08g01380 747 CDD Bromodomain 359 449 - -
Gma08g01380 747 Pfam Myb-like DNA-binding domain 32 65 IPR001005 -
Gma08g01380 747 MobiDBLite consensus disorder prediction 1 28 - -
Gma08g01380 747 Coils Coil 127 157 - -
Gma08g01380 747 SMART sant 29 84 IPR001005 -
Gma08g01380 747 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 15 747 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 556 593 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 449 747 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 594 625 - -
Gma08g01380 747 CDD SANT 32 64 IPR001005 -
Gma08g01380 747 MobiDBLite consensus disorder prediction 1 30 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 496 511 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 514 555 - -
Gma08g01380 747 SUPERFAMILY Bromodomain 352 454 IPR036427 GO:0005515
Gma08g01380 747 MobiDBLite consensus disorder prediction 684 710 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 666 681 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 147 178 - -
Gma08g01380 747 MobiDBLite consensus disorder prediction 147 348 - -
Gma08g01380 747 Gene3D - 311 460 IPR036427 GO:0005515
Gma08g01380 747 Pfam Bromodomain 359 435 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01380 Gma-Chr8 11724347 11728862 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma08g01380 Bromodomain 3.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01380 - - gmx:100811021 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02570 15 53727512 53732132 Gma08g01380 08 11724347 11728862 GST