Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01370 ATGCCCTTTAACCAAGATTTATTTGACTTTTTATTTGCACCAACTCAAGCATTGAATTCTCAAGGCGAGGAGGTTCATATGCCAATTGTTGATGATGCTAGCTATAATTCTTTGGATTTGGGACACAACAACTTGGAAAACAATGATGATGAAACTTTAACCGAAGAGGATATCTCTAATTTGATAGATTTATTACTTGAAGATGATACTTATATCTTTGATTTCATTGAGTTAGATGATGACAACCACAACACAGGAAACAATGGAGTTTCAAGAGTGGAATTTGCAAATCAAGTTAGTATTCAAAATCTTGAAAGGATCAGAATTCATGAAAATCCAGAGCAATCTTCAGACTTGATGTGTTCCATTTGTCTTGAGGAATTTTTGATTGGGACGATAACAATTCGCTTGCCCCACCCTTGCTATCACATCTTTCATGAACATTGTATAACAAGGTGGCTTAACATGAATAATACGTGTCCTTTGTGTCGTAGGACCATCTAG 504 0.3552 MPFNQDLFDFLFAPTQALNSQGEEVHMPIVDDASYNSLDLGHNNLENNDDETLTEEDISNLIDLLLEDDTYIFDFIELDDDNHNTGNNGVSRVEFANQVSIQNLERIRIHENPEQSSDLMCSICLEEFLIGTITIRLPHPCYHIFHEHCITRWLNMNNTCPLCRRTI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01370 167 PANTHER SI:CH211-59O9.10 33 167 - -
Gma08g01370 167 Pfam Ring finger domain 120 164 IPR001841 -
Gma08g01370 167 SMART ring_2 121 163 IPR001841 -
Gma08g01370 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 167 IPR013083 -
Gma08g01370 167 SUPERFAMILY RING/U-box 111 167 - -
Gma08g01370 167 ProSiteProfiles Zinc finger RING-type profile. 121 164 IPR001841 -
Gma08g01370 167 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED 33 167 - -
Gma08g01370 167 CDD RING-H2_PA-TM-RING 121 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01370 Gma-Chr8 11618819 11619322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01370 46 164 C3H Transcription Factor Family AT1G14200 31.933 9.68e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01370 - K22753 pvu:PHAVU_007G098000g 95.5153