Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01366 ATGGATCAAAACCAGCATGGTCAACCAACACAAGAAGCAGTTGGCAAGAACCAATATCAATCTAATCCTATGATGGCACCTACCAATCCTCCTAGTGAGACTATTGGTCCTTATGTCACATCATCCTTCCCTAGAGAGAAACAACATGCTCCCCAAGACATTTACCAGGAACAACTCAACAACTTTTGGGCAAAACAGTGCCAGGAAATTGAGGAGACCACTGATTTAAGGACTCACAGCTTGCCTTATGCTAGGATTAAGAAGATCATGAAGGCTGATAGGGATGTGAGGATGGTGTCAGCTGAGGCTCCCGTGTTGTTTGCCAAGGCCTGTGAAATGTTTATTATGGAGCTCACAATGAAGGCTTGGGCCAATGCTGAGGATCACAGAAGGAGGATACTTCAGAAGAGTGACATTGCATCTGCAATCTCAAAGACTGATGTGTTTGATTTTCTTGAGGATATTGTCCCCAGGGATGTAGGCATACCAAGATCAAGCATTGCTCAAAATTTTGATCTAAGTATGCCACCACATCAGAATGTCACATACCCACCATATTATGTTCCAGCAATGGTCACGGGAAGACCCATTCCTGATCAAAATCATCATGGGCCGTAA 618 0.4401 MDQNQHGQPTQEAVGKNQYQSNPMMAPTNPPSETIGPYVTSSFPREKQHAPQDIYQEQLNNFWAKQCQEIEETTDLRTHSLPYARIKKIMKADRDVRMVSAEAPVLFAKACEMFIMELTMKAWANAEDHRRRILQKSDIASAISKTDVFDFLEDIVPRDVGIPRSSIAQNFDLSMPPHQNVTYPPYYVPAMVTGRPIPDQNHHGP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01366 205 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 80 143 IPR003958 -
Gma08g01366 205 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 17 170 IPR027170 GO:0003700|GO:0006355|GO:0016602
Gma08g01366 205 MobiDBLite consensus disorder prediction 1 49 - -
Gma08g01366 205 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 17 170 - -
Gma08g01366 205 SUPERFAMILY Histone-fold 55 152 IPR009072 GO:0046982
Gma08g01366 205 Gene3D Histone, subunit A 42 158 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01366 Gma-Chr8 11552870 11553487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01366 1 196 CCAAT-HAP5 Transcription Factor Family AT1G08970 45.755 7.32e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma08g01366 CBFD_NFYB_HMF 1.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01366 K08066 - gmx:100808341 426.402