Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01360 ATGATGGCTTCTTCCTCTCTCTTCTACCTTTCTCTCTCCCTCATCCTAACCCTCACCTCCGCCGCGCGCCACAAACCCCACCCCTCACCGGCCAAGCCACCAGCCAAGCCCGCCGTGACCACCGCCACCTCGCCGGCAATTCAACAaGCCTGCGCCGCGACGCGCTTCCCGCAGCAATGCGAAGCCTCTCTCTCCCAATCCCAGAACCTCCCTCCGAACCCGAACCCGACCCCTCTCCAGCTCCTCCAGTCCGCCATCGCGCTCTCCTCCGACAACCTCGCCACCGCACAGACGATGGTCAAGTCACTCCACGACGCCTCCGCCGACAGCCGCAACCGCACCGTCGCCGCCGCCACCTGCATCGAGATATTAGCCAACTCCCATTACCGCATTTCCCTCGCCAGCGACGCGCTCCCACGAGGCAGGACCAAGGACGCGCGTGCTTGGCTCGGCGCCGCCCTCGCCTACCAGTACGACTGCTGGAACAGCCTCAAATATGCCAACGACACCGAAATGGTCGGCAAAACCATGTTGTTCATCGATAACCTCGAAACTCTCTCCAGCAACGCACTCAGCATGGCGTTTTCCTTCGACGCCTTCGGAAACGACACCGCTTCGTGGAAGCCCCCAGTAACGGAGCGCGACGGGTTCTGGGAGGCTGTGGGCTCGGGTGGCCCCGCGTCCGCGGGAGGGGTACCGCCGAATTTGACGCCCGACGTTACGGTGTGTAACAATGGAGGAGACGGGTGTTATAAGACGGTGCAGGAGGCCGTAAACGCCGCGCCAGCGAACGGAACAAAGAGGTTTGTGATATACATAAAAGAAGGGGTTTACGAGGAGACCGTTAGGATTCCATTAGAAAAGAGGAATGTGGTGTTCTTGGGCGACGGCATTGGCAAAACCGTCATCACCGGTAACGGCAACGTGGGACAACAAGGGATGACAACTTACAACTCTGCCACTGTCGCGGTTCTTGGCGATGGATTCATGGCAAAGGAACTGACGGTCGAAAACACAGCAGGTCCTGATGCTCACCAAGCAGTGGCATTCAGATTAGACAGTGATCTTTCTGTGATTGAGAATTGCGAATTCTTGGGCAATCAAGACACTCTCTATGCTCACTCACTGCGCCAGTTTTACAAGTCATGCCGCATTGAGGGCAGCGTGGACTTCATCTTTGGAAACGCTGCAGCAGTTTTCCAAGACTGCCAAATCCTAGTTCGTCCCAGGCAAGTGAAGCCAGAGAAGGGTGAGAACAATGCCATCACAGCACACGGCAGAACAGACCCTGCAGAACCCACAGGCTTTGTTTTCCAAAACTGTTTGATTAATGGCACTGAGGAATATATAGCATTGTACCTCAGCAAGCCTCAAGTGCACAAGAACTATTTGGGTAGGCCTTGGAAGGAGTATTCTAGAACGGTTTTCATTAATTCGATCTTGGAGGCTCTTGTCACACCACAGGGTTGGATGCCATGGAGCGGTGACTTTGCTCTCAAGACACTTTACTATGGGGAGTTTGAGAACAAGGGTACTGGCTCTGATTTGTCTCAGAGGGTGCCATGGAGTAGCAAGATCCCTGCTGAACACGTATTGACGTATTCGGTGCAGAATTTCATTCAAGGAAATGATTGGATTCCATCATCTGTTGGTAGCCCATCCTCGTAA 1668 0.5486 MMASSSLFYLSLSLILTLTSAARHKPHPSPAKPPAKPAVTTATSPAIQQACAATRFPQQCEASLSQSQNLPPNPNPTPLQLLQSAIALSSDNLATAQTMVKSLHDASADSRNRTVAAATCIEILANSHYRISLASDALPRGRTKDARAWLGAALAYQYDCWNSLKYANDTEMVGKTMLFIDNLETLSSNALSMAFSFDAFGNDTASWKPPVTERDGFWEAVGSGGPASAGGVPPNLTPDVTVCNNGGDGCYKTVQEAVNAAPANGTKRFVIYIKEGVYEETVRIPLEKRNVVFLGDGIGKTVITGNGNVGQQGMTTYNSATVAVLGDGFMAKELTVENTAGPDAHQAVAFRLDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIEGSVDFIFGNAAAVFQDCQILVRPRQVKPEKGENNAITAHGRTDPAEPTGFVFQNCLINGTEEYIALYLSKPQVHKNYLGRPWKEYSRTVFINSILEALVTPQGWMPWSGDFALKTLYYGEFENKGTGSDLSQRVPWSSKIPAEHVLTYSVQNFIQGNDWIPSSVGSPSS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01360 555 PANTHER PECTINESTERASE 16 549 - -
Gma08g01360 555 Pfam Plant invertase/pectin methylesterase inhibitor 46 193 IPR006501 GO:0004857
Gma08g01360 555 MobiDBLite consensus disorder prediction 23 43 - -
Gma08g01360 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 196 IPR035513 -
Gma08g01360 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 193 IPR035513 -
Gma08g01360 555 CDD PMEI-like_3 50 193 - -
Gma08g01360 555 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Gma08g01360 555 SMART PMEI_2 42 193 IPR006501 GO:0004857
Gma08g01360 555 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 16 549 - -
Gma08g01360 555 SUPERFAMILY Pectin lyase-like 238 548 IPR011050 -
Gma08g01360 555 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 192 IPR006501 GO:0004857
Gma08g01360 555 Gene3D - 234 552 IPR012334 -
Gma08g01360 555 Pfam Pectinesterase 239 543 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01360 Gma-Chr8 11531602 11534113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01360 34 545 Carbohydrate Esterase AT5G09760 63.127 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01360 - - gmx:100801231 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01875 05 40205992 40207337 Gma08g01360 08 11531602 11534113 GST
Gma08g01360 08 11531602 11534113 Gma06g01352 06 12711459 12713706 PCT
Gma06g01352 06 12711459 12713706 Gma08g01360 08 11531602 11534113 PCT