Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01350 ATGAAAACGATGGATTTTGAGCAATTTTATTACTCATTTGGCCCTCCTTACATGAATCAACTCCATGAGTGTATCTCAGAAAATGCATTTCCATTTCAAACAGAAAATCTCTTATCTCCAAATACTTTCCTAGATGAAATGTTTGATCAAGAGTACTCCATGGAAGGATTGCTGCAGCAACATGCAAACAACCAGGAGGACTTTGGTTTCTTGAAGCATGATGATCCACTAGAGACTGAATTTTGTCATGGATTTAGCCCTAGTGCTGAGGAAAATATGCATGTTTCAATGGAAGAAGGGGATTCTTGTTTGAAGGGAATCCAAGCAGAGCTAATGGAAGAGACTAGTTTAGCTGATCTGTTGCTAACAGGAGCTGAAGCTGTTGAAGCACAAAACTGGCCCCTTGCTTCAGATATAATTGAGAAACTTAACAATGCCTCATCTTTAGAAAATGGTGATGGTTTATTGAACAGGTTGGCTCTTTTCTTTACTCAGAGTCTCTATTATAAAAGCACAAATGCCCCTGAATTGCTACAGTGTGGTGCTGTTTCTACGCACACAAATGCTTTCTGTGTGTTTCAGGTTCTCCAAGAACTCTCTCCCTATGTAAAATTTGCTCATTTCACTGCAAACCAAGCAATCTTAGAGGCCACAGAAGGTGCTGAAGATCTTCACATCATTGATTTTGATATCATGGAGGGGATTCAGTGGCCACCCTTGATGGTTGACCTTGCAATGAAGAAAAGTGTTAATTCCCTTAGAGTAACAGCCATCACAGTGAACCAAAGAGGTGCAGATTCTGTTCAACAAACAGGAAGAAGGCTCAAAGAGTTTGCAGCTTCTATCAACTTTCCATTCATGTTTGACCAGTTAATGATGGAAAGGGAAGAAGATTTTCAAGGAATTGAACTTGGTCAAACACTCATAGTCAACTGCATGATACACCAGTGGATGCCTAATAGGAGCTTCTCATTGGTCAAAACATTCTTGGATGGTGTGACCAAATTGTCCCCAAGGCTTGTTGTTTTAGTGGAAGAAGAACTATTTAATTTTCCTAGGCTCAAGTCCATGTCCTTTGTGGAGTTCTTCTGTGAGGCTTTGCATCACTACACTGCACTTTGTGATTCACTTGCTAGTAATCTATGGGGTAGCCACAAGATGGAGTTGAGCCTGATAGAAAAAGAGGTTATTGGGCTCAGAATATTGGACAGTGTGAGGCAGTTTCCTTGTGAGAGAAAGGAGAGAATGGTGTGGGAGGAAGGGTTTTATTCCTTGAAAGGGTTTAAACGTGTACCTATGAGTACATGTAACATTTCACAAGCCAAATTCTTGGTAAGCCTCTTTGGTGGAGGGTATTGGGTCCAATACGAGAAGGGTAGGTTGGCCTTGTGTTGGAAGTCAAGGCCTTTGACTGTGGCTTCAATCTGGGAACCAATGGCTTATCTGGATGACAAGGTCAAATAG 1464 0.4119 MKTMDFEQFYYSFGPPYMNQLHECISENAFPFQTENLLSPNTFLDEMFDQEYSMEGLLQQHANNQEDFGFLKHDDPLETEFCHGFSPSAEENMHVSMEEGDSCLKGIQAELMEETSLADLLLTGAEAVEAQNWPLASDIIEKLNNASSLENGDGLLNRLALFFTQSLYYKSTNAPELLQCGAVSTHTNAFCVFQVLQELSPYVKFAHFTANQAILEATEGAEDLHIIDFDIMEGIQWPPLMVDLAMKKSVNSLRVTAITVNQRGADSVQQTGRRLKEFAASINFPFMFDQLMMEREEDFQGIELGQTLIVNCMIHQWMPNRSFSLVKTFLDGVTKLSPRLVVLVEEELFNFPRLKSMSFVEFFCEALHHYTALCDSLASNLWGSHKMELSLIEKEVIGLRILDSVRQFPCERKERMVWEEGFYSLKGFKRVPMSTCNISQAKFLVSLFGGGYWVQYEKGRLALCWKSRPLTVASIWEPMAYLDDKVK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01350 487 ProSiteProfiles GRAS family profile. 108 477 IPR005202 -
Gma08g01350 487 PANTHER OS12G0162700 PROTEIN 6 478 - -
Gma08g01350 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 478 IPR005202 -
Gma08g01350 487 Pfam GRAS domain family 118 477 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01350 Gma-Chr8 11436653 11438116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01350 191 477 GRAS Transcription Factor Family AT1G55580 36.129 3.50e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma08g01350 GRAS 5.2e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01350 - - gmx:100804613 991.104