Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01341 ATGGCAAATGAACTACCCGTCAAAGCTTTTGGTTGGGCTGCTTCAGACACTTCTGGCACCCTTGCCCCTTTTCATTTCTCCAGAAGGGAAAATGGCGTCGATGACGTCACTCTCAAGATTCTCTTCTGCGGGGTTTGCCACTCTGATCTCCACACTCTCAAAAACGACTGGGGTTTCACCACCTACCCTGTCGTTCCTGGGCATGAAATTGTTGGTGTTGTGACAGAAGTTGGAAACAATGTGAAAAACTTCAAAGTGGGTGATAAAGTTGGAGTTGGTGTGATAGTGGAGTCTTGCAAGGAATGTGAAAATTGCCAACAGGATCTGGAGAATTACTGTCCCCGCCCTGTGTTTACCTATAACTCTCCTTATTATGATGGGACACGAACCCAAGGTGGTTATTCTAACATTGTGGTCGTGCACCAGCGTTATGTGCTCCGGTTTCCTGAGAACTTGCCCCTTGATGCTGGTGCTCCTCTGCTGTGTGCTGGGATAACTGTGTATAGCCCAATGAAATATTATGGGATGACAGAGCCAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAACTTGCTAAGGCTTTTGGGCTCAAAGTTACTGTCATTAGTAGTTCTCCAAACAAGCAAGCTGAGGCCATTGACCGACTCGGGGCTGATTTTTTCCTTGTTTCATCAGACCCTGCAAAAATGAAGGCTGCTTTGGGAACCATGGACTATATCATAGACACAATTTCTGCTGTTCATTCCTTGATTCCACTGCTTGGTCTGCTGAAGCTGAATGGGAAGCTAGTTACTGTAGGGTTGCCTAACAAACCCCTTGAGCTTCCTATCTTTCCTTTAGTTGCAGGACGAAAGCTTATAGGGGGGAGCAACTTTGGAGGGCTGAAAGAAACTCAGGAAATGCTTGATTTCTGCGGAAAGCACAACATAACTGCAGATATTGAGCTGATTAAGATGGATCAGATCAACACAGCCATGGAAAGGCTTAGCAGAGCTGATGTGAAATATCGCTTTGTGATTGATGTGGCGAGCTCTTTCTCAAGTTTTTAG 1071 0.4613 MANELPVKAFGWAASDTSGTLAPFHFSRRENGVDDVTLKILFCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTEVGNNVKNFKVGDKVGVGVIVESCKECENCQQDLENYCPRPVFTYNSPYYDGTRTQGGYSNIVVVHQRYVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKLAKAFGLKVTVISSSPNKQAEAIDRLGADFFLVSSDPAKMKAALGTMDYIIDTISAVHSLIPLLGLLKLNGKLVTVGLPNKPLELPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNITADIELIKMDQINTAMERLSRADVKYRFVIDVASSFSSF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01341 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Gma08g01341 356 SMART PKS_ER_names_mod 19 347 IPR020843 GO:0016491
Gma08g01341 356 Gene3D - 163 319 - -
Gma08g01341 356 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 8 353 - -
Gma08g01341 356 SUPERFAMILY GroES-like 18 181 IPR011032 -
Gma08g01341 356 PANTHER ALDEHYDE REDUCTASE 8 353 - -
Gma08g01341 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 152 317 IPR036291 -
Gma08g01341 356 CDD CAD1 10 348 - -
Gma08g01341 356 Pfam Zinc-binding dehydrogenase 190 311 IPR013149 -
Gma08g01341 356 Gene3D - 12 349 - -
Gma08g01341 356 Pfam Alcohol dehydrogenase GroES-like domain 34 146 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01341 Gma-Chr8 11343145 11346521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01341 8 353 Monolignol Biosynthesis Gene Families AT2G21730 70.977 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01341 K00083 - gmx:100795575 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01849 05 39983620 39987683 Gma08g01341 08 11343145 11346521 GST