Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01334 ATGAAGAACGATAGAGAAAAGGGTAACGAGGTTGACCAGAGTTACATACAGCAGCACCACTCGTTGTCAATGCCAATGATGTTTTCGGGTTTTAACAGAGAGAAGGAGATGTCAGCCATGATCACTGCTTTGACACGTGTGGTTTGTGGAGATTATTCTCTTGTTCATCACAATATTGATAATACTAATAGTGCAATTGTTGGTGGTGGTGGTGGTGATGATGTTTCAAATATGGCTTCTGGTTCTATGCCACCTTCGTCTACTTCTTTATCTCATGGTGGCAACTCTGTTCTCAAGAGAAGAAGGGAAGATGATAATACAAGTGATTTCTTACGTGGAGGTTCATTCCCTGCTATTTTAACAACTGCGGAAGGTTCAAGCACGATAAGAAGAAGAAGAGCGAATACGGTATACGATTACGAATACAGAAGAGAGAAGGTGAAAGTGGAGGAGGAAGAAGAAGCGAGGAGGAAATACAGAGGAGTGAGACAGAGGCCGTGGGGGAAATGGGCTGCGGAAATAAGAGACCCTTTGAAAGCCAGAAGGGTGTGGTTAGGAACATTTGAAACCGCTGAGGACGCAGCCAGAGCGTACGATCAAGCTTCCTTGCGTTTCAGAGGCAACAAAGCCAAACTCAACTTCCCTGAAAACGTTAGGCTCAGACACACTGAGACTCTTCAGGGTTCACGTGCTTCAAGCAATTTTTATGACAACTCTTATTCGCATGTTCATGATTTACCCGTGAGCCTCTACGATCAGACTACCATGGCTTCTTCATCAACTATATCTATGACTTCTCCCCAGGCACCACCTTCGATTTATCCTACGCATCTACTACCGGCATGGTCTTCTGGTTATGCTTATAATAGCTCCTCTTCTTCTGCCTGA 888 0.4448 MKNDREKGNEVDQSYIQQHHSLSMPMMFSGFNREKEMSAMITALTRVVCGDYSLVHHNIDNTNSAIVGGGGGDDVSNMASGSMPPSSTSLSHGGNSVLKRRREDDNTSDFLRGGSFPAILTTAEGSSTIRRRRANTVYDYEYRREKVKVEEEEEARRKYRGVRQRPWGKWAAEIRDPLKARRVWLGTFETAEDAARAYDQASLRFRGNKAKLNFPENVRLRHTETLQGSRASSNFYDNSYSHVHDLPVSLYDQTTMASSSTISMTSPQAPPSIYPTHLLPAWSSGYAYNSSSSSA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01334 295 PANTHER DNA-BINDING DOMAIN PROTEIN 1 289 - -
Gma08g01334 295 Pfam AP2 domain 158 207 IPR001471 GO:0003700|GO:0006355
Gma08g01334 295 Gene3D AP2/ERF domain 157 217 IPR036955 GO:0003700|GO:0006355
Gma08g01334 295 PANTHER DNA-BINDING DOMAIN 1 289 IPR044808 GO:0003700|GO:0009873
Gma08g01334 295 MobiDBLite consensus disorder prediction 79 95 - -
Gma08g01334 295 ProSiteProfiles AP2/ERF domain profile. 158 215 IPR001471 GO:0003700|GO:0006355
Gma08g01334 295 CDD AP2 159 217 IPR001471 GO:0003700|GO:0006355
Gma08g01334 295 SMART rav1_2 158 221 IPR001471 GO:0003700|GO:0006355
Gma08g01334 295 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Gma08g01334 295 PRINTS Ethylene responsive element binding protein signature 181 197 IPR001471 GO:0003700|GO:0006355
Gma08g01334 295 MobiDBLite consensus disorder prediction 61 110 - -
Gma08g01334 295 SUPERFAMILY DNA-binding domain 158 216 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01334 Gma-Chr8 11289632 11290938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01334 136 220 AP2-EREBP Transcription Factor Family AT5G61890 63.636 1.03e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma08g01334 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01334 - - gmx:100792946 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01842 05 39919748 39922318 Gma08g01334 08 11289632 11290938 GST