Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01317 ATGGGTCTCTTTACACTGTCCGTTATGGTTAATGACTCTGCCATTTCATTACCAGATACTTGTACGAAAAGAAAGCAGAACTTACTTCTGAAAAATTCTTTTGCATCAGTTAGCATGGGAGATGAAAAGCCATTTGACTTCCTACGCACTTTATTTGAGGGCGTTATTGCAGGTGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATTGACACAATAAAAACACGTCTGCAGGCAGGAGAAAAACTAATATTGAAGGGCCTTTATTCTGGATTGGCGGGGAACCTTGTTGGTGTCTTACCGGCATCTGCTTTATTTGTTGGAGTTTATGAACCTATAAAGCAGAAATTGCTGAGGATATTTCCTGAACACCTAAGTGCTTTTACTCATTTGACTGCAGGTGCCATAGGGGGCATTGCTGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTGCTTCAGCTTCTGGTGCTGTTCGCTTTATTGCTTCTAAGGAAGGCTTCAAAGGATTTTATGCTGGATATGGATCTTTTTTGTTGAGGGATTTACCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACAAAGAAATCTGAATGATCCAGAAAATGCAATTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTCATCAAGACAAGGTTAATGGTTCAAGGATCTGCAAACCAATATAAGGGAATCGTTGACTGTGTTCAAACCATTATTAAGGAAGAAGGACCTCGTGCCTTTTTGAAGGGTATTGGTCCCAGAGTACTATGGATAGGCATAGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTACAAAGCGTTTTCTTTCTGAGAGACGCCCTACCGTACCTCAGAACACATATTCAGAGAAGAGCAAAGATTAA 972 0.4115 MGLFTLSVMVNDSAISLPDTCTKRKQNLLLKNSFASVSMGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAGEKLILKGLYSGLAGNLVGVLPASALFVGVYEPIKQKLLRIFPEHLSAFTHLTAGAIGGIAASLIRVPTEVIKQRMQTGQFASASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAAQRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIIKEEGPRAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLSERRPTVPQNTYSEKSKD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01317 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 118 IPR018108 -
Gma08g01317 323 Gene3D Mitochondrial carrier domain 51 318 IPR023395 -
Gma08g01317 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 222 304 IPR018108 -
Gma08g01317 323 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 6 315 - -
Gma08g01317 323 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 6 315 - -
Gma08g01317 323 Pfam Mitochondrial carrier protein 222 307 IPR018108 -
Gma08g01317 323 Pfam Mitochondrial carrier protein 126 208 IPR018108 -
Gma08g01317 323 Pfam Mitochondrial carrier protein 51 82 IPR018108 -
Gma08g01317 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 209 IPR018108 -
Gma08g01317 323 SUPERFAMILY Mitochondrial carrier 52 299 IPR023395 -
Gma08g01317 323 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Gma08g01317 323 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
Gma08g01317 323 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01317 Gma-Chr8 11137882 11144386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01317 127 310 Chloroplast and Mitochondria Gene Families AT1G07030 31.217 1.27e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01317 K15111 - gmx:100799825 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01828 05 39780285 39789033 Gma08g01317 08 11137882 11144386 GST