Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g01292 | ATGGATGCTACATCCTCACAGTTTGTTTCCTCAAGAAGAATGGGTGTATATGATCCTATCCACCAAATTAGCATGTGGGAAGAAACTTTCAAAAGTAATGATACTAATAATTTAACTGTATCCACATCCATAATTGGGGAGGTGGAGATGAAGTTAGATAATCAGGTTCATGTGCAATCAGAGGATGCTTCTCATGGAATATTTGGAACATCTGTGAAGTACGACCAAGATGCCAACAGGCTTACTGATAAGACACAAAGACGTCTTGCACAAAATCGAGAGGCCGCTCGCAAGAGTCGTTTGAGGAAAAAGGCATACGTGCAGCAGTTAGAATCATGTCGTTTGAAGCTCGTGCAGCTAGAGCAAGAGGTAGATCATGCAAAACAACAGGGATTGTATATTGGCGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGGAATAACGCTTTTCAAGATGGAGTATGGAAACTGGCTGGAGGAGCAAAATAGACAAATTTTAGAACTGAGAACTGCTTTAAGTTCTCATATAGGTGACATACAGCTCGGGACACTTGTACAGGGCATAATGAACCACTACACCAAACTCTTTAGCATGAAATCTGCTGCAGCAAAAGCAGATGTTTTCTATGTTATGTCTGGTATGTGGAAGACAACAGCTGAACGATTTTTCTTGTGGATTGGAGGATTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTCCCTCTAAGTGAACCTTTGACAGAGCAACAACGGTTTGATGCTTATGGCCTTGAAAAATCATGCCAGCAAGCAGAAGATGCTCTTTCACAAGGTATGGAAAAACTTCAGCAAATGCTCGCTGACTCTGTAGGACCAGGACAACTAGTTGAAGGAACTCACATTCCCCAAATGGATACTGCAATGGAGAGACTAGAAGCACTTGTGAGCTTTGTGAACCAGGCTGATCATCTACGACAAGAAACATTGAGGCAAATGTATCGAATACTTACCACACGTCAGACTGGTCGATTTCTGCTTGATTTGGGTGAATATTTTCAACGCCTGCGGGCTTTGAGCAAACTTTGGGCTAATCGTCCTCAAGAACTTACTAAGTCAGTCATCAAACATTAG | 1125 | 0.4213 | MDATSSQFVSSRRMGVYDPIHQISMWEETFKSNDTNNLTVSTSIIGEVEMKLDNQVHVQSEDASHGIFGTSVKYDQDANRLTDKTQRRLAQNREAARKSRLRKKAYVQQLESCRLKLVQLEQEVDHAKQQGLYIGDGLGSNNLGFAGSVNSGITLFKMEYGNWLEEQNRQILELRTALSSHIGDIQLGTLVQGIMNHYTKLFSMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLVPLSEPLTEQQRFDAYGLEKSCQQAEDALSQGMEKLQQMLADSVGPGQLVEGTHIPQMDTAMERLEALVSFVNQADHLRQETLRQMYRILTTRQTGRFLLDLGEYFQRLRALSKLWANRPQELTKSVIKH | 374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g01292 | 374 | PANTHER | BZIP FAMILY TRANSCRIPTION FACTOR | 1 | 368 | - | - | |
Gma08g01292 | 374 | Coils | Coil | 266 | 286 | - | - | |
Gma08g01292 | 374 | SMART | brlzneu | 80 | 140 | IPR004827 | GO:0003700|GO:0006355 | |
Gma08g01292 | 374 | Coils | Coil | 103 | 130 | - | - | |
Gma08g01292 | 374 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 87 | 102 | IPR004827 | GO:0003700|GO:0006355 | |
Gma08g01292 | 374 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 368 | - | - | |
Gma08g01292 | 374 | Pfam | Seed dormancy control | 171 | 245 | IPR025422 | GO:0006351|GO:0043565 | |
Gma08g01292 | 374 | Gene3D | - | 83 | 132 | - | - | |
Gma08g01292 | 374 | Pfam | bZIP transcription factor | 83 | 112 | IPR004827 | GO:0003700|GO:0006355 | |
Gma08g01292 | 374 | SUPERFAMILY | Leucine zipper domain | 84 | 123 | IPR046347 | GO:0003700|GO:0006355 | |
Gma08g01292 | 374 | ProSiteProfiles | DOG1 domain profile. | 153 | 363 | IPR025422 | GO:0006351|GO:0043565 | |
Gma08g01292 | 374 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 82 | 112 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g01292 | Gma-Chr8 | 10961012 | 10968014 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g01292 | 1 | 368 | Calmodulin-binding Proteins | AT5G65210 | 65.499 | 1.19e-177 | 496 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gma08g01292 | DOG1 | 2.1e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g01292 | K14431 | - | gmx:100780003 | 739.569 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma05g01802 | 05 | 39624472 | 39631235 | Gma08g01292 | 08 | 10961012 | 10968014 | GST | |
Gma08g01292 | 08 | 10961012 | 10968014 | Gma18g00192 | 18 | 1557890 | 1563668 | PCT | |
Gma08g01292 | 08 | 10961012 | 10968014 | Gma11g02383 | 11 | 39204045 | 39209870 | PCT |