Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01292 ATGGATGCTACATCCTCACAGTTTGTTTCCTCAAGAAGAATGGGTGTATATGATCCTATCCACCAAATTAGCATGTGGGAAGAAACTTTCAAAAGTAATGATACTAATAATTTAACTGTATCCACATCCATAATTGGGGAGGTGGAGATGAAGTTAGATAATCAGGTTCATGTGCAATCAGAGGATGCTTCTCATGGAATATTTGGAACATCTGTGAAGTACGACCAAGATGCCAACAGGCTTACTGATAAGACACAAAGACGTCTTGCACAAAATCGAGAGGCCGCTCGCAAGAGTCGTTTGAGGAAAAAGGCATACGTGCAGCAGTTAGAATCATGTCGTTTGAAGCTCGTGCAGCTAGAGCAAGAGGTAGATCATGCAAAACAACAGGGATTGTATATTGGCGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGGAATAACGCTTTTCAAGATGGAGTATGGAAACTGGCTGGAGGAGCAAAATAGACAAATTTTAGAACTGAGAACTGCTTTAAGTTCTCATATAGGTGACATACAGCTCGGGACACTTGTACAGGGCATAATGAACCACTACACCAAACTCTTTAGCATGAAATCTGCTGCAGCAAAAGCAGATGTTTTCTATGTTATGTCTGGTATGTGGAAGACAACAGCTGAACGATTTTTCTTGTGGATTGGAGGATTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTCCCTCTAAGTGAACCTTTGACAGAGCAACAACGGTTTGATGCTTATGGCCTTGAAAAATCATGCCAGCAAGCAGAAGATGCTCTTTCACAAGGTATGGAAAAACTTCAGCAAATGCTCGCTGACTCTGTAGGACCAGGACAACTAGTTGAAGGAACTCACATTCCCCAAATGGATACTGCAATGGAGAGACTAGAAGCACTTGTGAGCTTTGTGAACCAGGCTGATCATCTACGACAAGAAACATTGAGGCAAATGTATCGAATACTTACCACACGTCAGACTGGTCGATTTCTGCTTGATTTGGGTGAATATTTTCAACGCCTGCGGGCTTTGAGCAAACTTTGGGCTAATCGTCCTCAAGAACTTACTAAGTCAGTCATCAAACATTAG 1125 0.4213 MDATSSQFVSSRRMGVYDPIHQISMWEETFKSNDTNNLTVSTSIIGEVEMKLDNQVHVQSEDASHGIFGTSVKYDQDANRLTDKTQRRLAQNREAARKSRLRKKAYVQQLESCRLKLVQLEQEVDHAKQQGLYIGDGLGSNNLGFAGSVNSGITLFKMEYGNWLEEQNRQILELRTALSSHIGDIQLGTLVQGIMNHYTKLFSMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLVPLSEPLTEQQRFDAYGLEKSCQQAEDALSQGMEKLQQMLADSVGPGQLVEGTHIPQMDTAMERLEALVSFVNQADHLRQETLRQMYRILTTRQTGRFLLDLGEYFQRLRALSKLWANRPQELTKSVIKH 374
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01292 374 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 368 - -
Gma08g01292 374 Coils Coil 266 286 - -
Gma08g01292 374 SMART brlzneu 80 140 IPR004827 GO:0003700|GO:0006355
Gma08g01292 374 Coils Coil 103 130 - -
Gma08g01292 374 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Gma08g01292 374 PANTHER TRANSCRIPTION FACTOR TGA9 1 368 - -
Gma08g01292 374 Pfam Seed dormancy control 171 245 IPR025422 GO:0006351|GO:0043565
Gma08g01292 374 Gene3D - 83 132 - -
Gma08g01292 374 Pfam bZIP transcription factor 83 112 IPR004827 GO:0003700|GO:0006355
Gma08g01292 374 SUPERFAMILY Leucine zipper domain 84 123 IPR046347 GO:0003700|GO:0006355
Gma08g01292 374 ProSiteProfiles DOG1 domain profile. 153 363 IPR025422 GO:0006351|GO:0043565
Gma08g01292 374 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 112 IPR004827 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma08g01292 Gma-Chr8 10961012 10968014 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01292 1 368 Calmodulin-binding Proteins AT5G65210 65.499 1.19e-177 496
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma08g01292 DOG1 2.1e-29 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01292 K14431 - gmx:100780003 739.569
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01802 05 39624472 39631235 Gma08g01292 08 10961012 10968014 GST
Gma08g01292 08 10961012 10968014 Gma18g00192 18 1557890 1563668 PCT
Gma08g01292 08 10961012 10968014 Gma11g02383 11 39204045 39209870 PCT