Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01279 ATGCAAAGAACAGAGTTCTCCCAAACACTTCAATCAAACATGGCTTTACCAGCCAATGAAACCTCCATGGCAGAAAGGTCTCAGTGGGTGCTCAATGCTCCTGCTCCCCCATCCACGTGGCACAACCTCATGGCTTCTGTGAGGAACACAATTTCATCGTACCAAAAAATGTGTTCTTATATAAGAGGCCAACCTGGACCCAAAGTTGTGCTTTCCTTCTTGCGGAGCATTTTTCCTATTCTTCATTGGGGTCGTAATTATTCACCAACCAAATTCAGAAACGACTTACTTGCAGGTCTTACCATTGCAAGTCTCTGCATTCCTCAGAGCATTGGGTATGCCACTTTAGCAAAGCTTGATCCTGAATATGGACTCTATACGAGTGTGGTGCCACCTCTTATCTATGCTTTAATGGGAACTTCAAGAGAAATAGCAATTGGACCCGTGGCCGTGGTATCGCTTCTTTTGTCATCAATGATTCAGAAATTAATAGACCCTGCCATTGATCCAAATGGGTATAGAAAGCTTGTTTTCACTACCACTTTCTTTGCTGGCATATTTCAAGCTGCTTTTGGACTCTTCAGGTTGGGGTTCCTTGTGGATTTTCTGTCTCATGCTGCTATTGTTGGATTCATGGGGGGAGCAGCTATAATAATTGGTCTACAACAGCTGAAGGGACTATTTGGGATCAATCATTTTACGAACAAAACAGACATAATCTCTGTCATGAAATCCGTTTGGGAATCGGTTGATCATCCCTGGAATCCTCGCAATTTTGTCCTTGGATGTTCATTCTTCATTTTCATCCTGTTTACCAGATTTCTGGGTAAAAGGAATAAGAAACTTTTCTGGCTGCCAGCAATATCCCCTCTTGTGTCAGTTATGCTATCAACTCTTATTGTTTTTCTGACAAGAGCCGACAAAAGTGGAGTTAATATTGTGAGACATATAAAAGGAGGATTGAACCCAAGCTCTATCAATCAGATAGACTTGAACAGCCCCCATATTGGAGCATTGGCCAAAATTGGACTAGTTGTTGCTGCTGTTGCACTCACTGAATCAGTTGCTGTTGGCCGATCTTTTGCATCCATGAAAGGATACCATCTAGATGGAAACAAGGAGATGGTGTCATTAGGGTTCATGAACATCATAGGATGCTTCACCTCATGCTATGTTGCAACTGGTTCGTTCTCCCGCACGGTGGTTAATTTCACAGCGGGTTGTGAAACATTAGCGTCGAACATTGTGATGGCCATTGTGGTCTTGATATCACTACAATGTTTGACAAAGCTATTGTACTTTACCCCAACTGCTATTCTCGCTTCAATAATCCTTTCTGCTCTCCCGGGACTCATTGACATCAATGAAGCTTACAAAATATGGAAAGTTGATAAGCTTGATTTTCTTGCTTGTGTTGGAGCCTTCTTCGGGGTGCTCTTTGCGTCAGTGGAACTTGGTCTGCTAGTGGCTGTGGGTATATCTTTTACAAAGATAATATGGATCTCAATTGGAGCAGGCACAGAAACTCTGGGAAGACTTCCCGGCACAGATGTGTTCTGCGATGCACAACAGTATCCTATGGCTGTTAAGATTCCTGGGGTTGCAATAATACGCGTCAAGTCTTCATTGCTTTGCTTTTCTAATGCAAATTCAGTCAGAGAAAGGATCCTGAAATGGATATCCCGGGAAGAAGCCAAGGGAAACATAGAAGACAACACCGGAAGCATAATTCAGCTCGTAATCCTTGACACCTCTAATTTGGTGAGCATTGACACCTCAGGAATTGCTTCTCTTGAGGAACTGCACAAGAGTTTGGTCTCAAGTGGGAAGCATCTAGCAATTGCCAATCCTCGTTGGCAAGTGATTTATAAGCTAAAGGCGACCAACTTTGTCACAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGAGAAGCTATTGACTGCAAGCTGGATTTCTGA 1959 0.4298 MQRTEFSQTLQSNMALPANETSMAERSQWVLNAPAPPSTWHNLMASVRNTISSYQKMCSYIRGQPGPKVVLSFLRSIFPILHWGRNYSPTKFRNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSVVPPLIYALMGTSREIAIGPVAVVSLLLSSMIQKLIDPAIDPNGYRKLVFTTTFFAGIFQAAFGLFRLGFLVDFLSHAAIVGFMGGAAIIIGLQQLKGLFGINHFTNKTDIISVMKSVWESVDHPWNPRNFVLGCSFFIFILFTRFLGKRNKKLFWLPAISPLVSVMLSTLIVFLTRADKSGVNIVRHIKGGLNPSSINQIDLNSPHIGALAKIGLVVAAVALTESVAVGRSFASMKGYHLDGNKEMVSLGFMNIIGCFTSCYVATGSFSRTVVNFTAGCETLASNIVMAIVVLISLQCLTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKLDFLACVGAFFGVLFASVELGLLVAVGISFTKIIWISIGAGTETLGRLPGTDVFCDAQQYPMAVKIPGVAIIRVKSSLLCFSNANSVRERILKWISREEAKGNIEDNTGSIIQLVILDTSNLVSIDTSGIASLEELHKSLVSSGKHLAIANPRWQVIYKLKATNFVTRIGGRVFLTIGEAIDCKLDF 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01279 652 TIGRFAM sulP: sulfate permease 79 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma08g01279 652 PANTHER SULFATE TRANSPORTER 16 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma08g01279 652 Pfam Sulfate permease family 92 472 IPR011547 GO:0016021
Gma08g01279 652 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 16 648 - -
Gma08g01279 652 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Gma08g01279 652 Pfam STAS domain 525 645 IPR002645 -
Gma08g01279 652 Gene3D STAS domain 506 649 IPR036513 -
Gma08g01279 652 SUPERFAMILY SpoIIaa-like 529 647 IPR036513 -
Gma08g01279 652 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Gma08g01279 652 ProSiteProfiles STAS domain profile. 544 649 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01279 Gma-Chr8 10857685 10864584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01279 25 647 Inorganic Solute Cotransporters AT5G10180 68.860 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01279 K17469 - gmx:100775538 1281.16