Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01268 ATGGGAACTGCTATAGACATGTACAACAGCAGCAACATCGTAGCGGATTTCCTAGATCCGTATAGTGAAGAGCTGATGAAAGCACTTAAGCCTTTTATGAAAAGTGATTATTTCTCTGCCTCTTCTTCTTCTTCACTCGAATCACAGCCTTGTTCTTTTTCATCTAATTCTCTCCCCACTTCGTATCCCTCTTCCAACCAAATCAAGCTCAACCAACTCACCCCAGACCAAATTGTTCAGATTCAGGCCCAAATCCACATTCAGCAGCAGCAGCAGCACGTGGCCCAAACCCAAACCCACCTGGGCCCAAAACGCGTCCCCATGAAGCACGCTGGCACGGCCGCGAAACCCACGAAGCTCTACCGCGGGGTGCGGCAACGGCATTGGGGCAAGTGGGTCGCTGAAATCAGACTCCCAAAGAACCGCACGCGCCTCTGGCTAGGAACATTCGACACCGCAGAGGAAGCAGCATTAGCGTACGACAACGCAGCGTTTAAGCTCAGAGGCGAGTTCGCGCGTCTCAATTTTCCTCATCTAAGACACCACGGAGCCTTCGTTTTCGGCGAGTTCGGAGATTACAAGCCTCTACCTTCTTCCGTGGATTCCAAACTGCAAGCTATTTGCGAAAGCTTAGCGAAACAAGAGGAAAAGCCGTGTTGCTCCGTCGAAGACGTGAAGCCCGTGATACACGCTGCTGAGCTGGCAGAGGTCGAGTCTGACGTGGCAAAATCGAACGCTGAATATGTTTATCCCGAGTTCGAGGATTTTAAGGTCGAGCACGAGAACCCAATTGGGATGAAATGGAGAATTTTGGGTTGGAGAAGTTCCCTTCTGTGGAGATTGATTGGGAAGCTATATGATGACTCGGTTTATGTTTCGCTAGTGTCTTTGGCTGCTTCTGCAATGGATTTTTTGACATTTGCGGATGTTTTGCTGAGACACGAGGGTTGCAAATTTTAG 960 0.4958 MGTAIDMYNSSNIVADFLDPYSEELMKALKPFMKSDYFSASSSSSLESQPCSFSSNSLPTSYPSSNQIKLNQLTPDQIVQIQAQIHIQQQQQHVAQTQTHLGPKRVPMKHAGTAAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAFKLRGEFARLNFPHLRHHGAFVFGEFGDYKPLPSSVDSKLQAICESLAKQEEKPCCSVEDVKPVIHAAELAEVESDVAKSNAEYVYPEFEDFKVEHENPIGMKWRILGWRSSLLWRLIGKLYDDSVYVSLVSLAASAMDFLTFADVLLRHEGCKF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01268 319 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Gma08g01268 319 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Gma08g01268 319 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Gma08g01268 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 244 - -
Gma08g01268 319 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Gma08g01268 319 CDD AP2 119 179 IPR001471 GO:0003700|GO:0006355
Gma08g01268 319 Gene3D AP2/ERF domain 120 178 IPR036955 GO:0003700|GO:0006355
Gma08g01268 319 SUPERFAMILY DNA-binding domain 120 178 IPR016177 GO:0003677
Gma08g01268 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 244 - -
Gma08g01268 319 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01268 Gma-Chr8 10788682 10789808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01268 1 217 AP2-EREBP Transcription Factor Family AT1G78080 50.397 3.98e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma08g01268 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01268 K09286 - gmx:100818839 483.796