Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01267 ATGACGCAGAATGCAATAGTGTCCAAGACAAAATCCGGGATCAAGGGGGACATAGCCGTGGCACAGAAGCCACTGGCGGCGCCTCCGCCGCCGGGGTACATTCCCATTCCGAGGAGGAGGGTTTTGAAGAACCTCGAAATCAATGGAGGACAAAGAATTAATGCATGGGTTGATTCCATGAGAGCCTCTTCTCCAACCAATTCCAAATCCACCTCTTCTCTCGCAGAAGAACACAGCTCTTGGATTCTTCGCCACCCTTCAGCATTAGACATGTTTGAGCAAATTATGGATGCGTCCAGGGGAAAGCAAATTGTCATGTTCCTCGACTATGATGGTACTTTGTCGCCTATTGTTGATGACCCAGACCATGCTTTCATGTCGGATTCGATGAGGAGAACGGTGAGGAAACTTGCAAGGTGTTTTCCTACTGCTATAGTTACCGGCAGATGCAAAGACAAGGTTTACAGTTTTGTTCGCTTGGCTGAGCTATATTATGCTGGAAGCCATGGCATGGATATTCAAGGGCCAACAAGAGACTGCAAATACAGCAAAGACAAAGGAGAGCCAGTTCTTTTTCAACCTGCCAGTGAATTTCTTCCCATGATTGATGAGGTGCACCATCAATTAGTTGAGAAAATGAAATCAATTCCTGGAGCCAAGGTGGAGAACAATAAGTTCTGCTGTTCTGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACAAGAAGTGAGATCAGTATTAAAAGAGTACCCGAAGCTTCGTCTTAACCAAGGAAGGAAGGTATTGGAGATTCGTCCATCTATTAAATGGGACAAAGGAAAGGCGCTGGAATTTTTGTTAGAGTCACTCGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTACATTGGAGATGATAAAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTCTGGGATTCTTGTCTCGAAATTTCCAAAGGACACTAGTGCATCATACTCTTTACAAGAACCAAACGAGGTGATGGATTTCCTTCAACGTTTGGTTGAGTGGAAACAAGTATCCCTCCGACTCAGAACACGTTCTCGGGTGTAA 1101 0.4469 MTQNAIVSKTKSGIKGDIAVAQKPLAAPPPPGYIPIPRRRVLKNLEINGGQRINAWVDSMRASSPTNSKSTSSLAEEHSSWILRHPSALDMFEQIMDASRGKQIVMFLDYDGTLSPIVDDPDHAFMSDSMRRTVRKLARCFPTAIVTGRCKDKVYSFVRLAELYYAGSHGMDIQGPTRDCKYSKDKGEPVLFQPASEFLPMIDEVHHQLVEKMKSIPGAKVENNKFCCSVHFRCVDEKKWSELAQEVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFKKLRDRGQGSGILVSKFPKDTSASYSLQEPNEVMDFLQRLVEWKQVSLRLRTRSRV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01267 366 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 106 316 IPR006379 -
Gma08g01267 366 Pfam Trehalose-phosphatase 107 340 IPR003337 GO:0003824|GO:0005992
Gma08g01267 366 TIGRFAM T6PP: trehalose-phosphatase 102 351 IPR003337 GO:0003824|GO:0005992
Gma08g01267 366 Gene3D - 104 188 IPR023214 -
Gma08g01267 366 Gene3D - 202 363 IPR023214 -
Gma08g01267 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 363 IPR044651 GO:0004805|GO:0005992
Gma08g01267 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 363 - -
Gma08g01267 366 CDD HAD_TPP 105 344 - -
Gma08g01267 366 SUPERFAMILY HAD-like 105 353 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01267 Gma-Chr8 10756211 10759073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01267 93 350 Trehalose Biosynthesis Gene Families AT1G70290 25.725 2.02e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01267 K01087 - gmx:100788735 709.523