Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01249 ATGACAAAATCGTTCCAAAGTTACGCTGAACTGAAGAAACAGGCTGAGAAGGACGACCTTGAAGACTCTCATGACATTGAAGCAGGGAAACTCGACAAACCCACGGAAGACCATAACCACCTCTCTCAGTTCTTCCAAGAAGTTGAAGCAATCAAGGTTGAAATAGAAGAGATCGCGAACCTCTTATTGGACCTTTTGCAACTGCACGAAGAAGACCGCATGGTGTCTGACATGGTTGCCTTGTTTTGCAAGGCAAGGATCATCAAGTCAAGGCTCGAGGTTATTGACCAATCCAACATAACCAATCGCACTTTATCAGAATCCTACATAGAAGTAACCCAAataagAATGTCTGTCACAAATGGTTTGAGGGCAAAACTTAGGGTCATGTTGATGCATGGATTTCAGTCCTTGAGAGACAAGTTTCTCATGGAGAAAATGATTTCGAGGAGTCTCAAAGTTGAGTTTATGGTTGCTGCAGCAGGGAAAACGGATATTGATAATGCTGATTTGGGTGTTAGGCATGAGGAAGTGATCATGGATATCCAGAGGAGTTTGAATATGCTTGACCAGATTTTTGTTGACATAGCTATTTTGGTTGAGACCCAAGGAGAAAACTTGGATAGCATTGAGGATCGTGTGGCCAGTGTTGTTAACAATGCTAACCAAATGAAGAGGAAGAACACCAACACAGAATGGCTCTGTTGGGTTCTTGTGGTGATGCTGCTGACTGTGTTTCTTTACTGGGGGAGAAATTTGGAGGGAGTGGTTTAG 774 0.4289 MTKSFQSYAELKKQAEKDDLEDSHDIEAGKLDKPTEDHNHLSQFFQEVEAIKVEIEEIANLLLDLLQLHEEDRMVSDMVALFCKARIIKSRLEVIDQSNITNRTLSESYIEVTQIRMSVTNGLRAKLRVMLMHGFQSLRDKFLMEKMISRSLKVEFMVAAAGKTDIDNADLGVRHEEVIMDIQRSLNMLDQIFVDIAILVETQGENLDSIEDRVASVVNNANQMKRKNTNTEWLCWVLVVMLLTVFLYWGRNLEGVV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01249 257 PANTHER SYNTAXIN-112 144 250 - -
Gma08g01249 257 PANTHER SYNTAXIN-112 7 143 - -
Gma08g01249 257 SMART SynN_4 36 148 IPR006011 GO:0016020
Gma08g01249 257 Gene3D - 36 147 - -
Gma08g01249 257 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 179 231 IPR000727 -
Gma08g01249 257 Pfam Syntaxin 43 145 IPR006011 GO:0016020
Gma08g01249 257 SUPERFAMILY t-snare proteins 40 222 IPR010989 GO:0016020|GO:0016192
Gma08g01249 257 Coils Coil 207 227 - -
Gma08g01249 257 Gene3D - 169 231 - -
Gma08g01249 257 PANTHER SYNTAXIN 7 143 IPR045242 -
Gma08g01249 257 PANTHER SYNTAXIN 144 250 IPR045242 -
Gma08g01249 257 MobiDBLite consensus disorder prediction 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01249 Gma-Chr8 10612535 10613450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01249 1 247 SNARE and Associated Proteins AT2G18260 38.591 1.20e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01249 K08486 - gmx:100779708 233.032