Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01240 ATGGCGGCGTGCATCAGCTTCACCGCCACGCGCGACCGCTGCTTCCGCTTCACCTTCTCCAACGCAGGCCTCAAATCCGCCACCACGGACCTCGGCGACGGCACCATCATGCACTGGTGGGCCCCCAAGGCCCCCAAGGACTCCAAGCCCAACCTCCTCCTCCTCCACGGCTTCGGGGCCAACGCAATGTGGCAGTGGAACGACGTCCTCTCGCCCCTCACGCGCCGCTTCAACGTCTACGTCCCCGACCTCGTCTTCTTCGGGGACTCCCACACGACCCGCCCCGAACGCTCCGAGGCCTTCCAGGCCCAGTGCGTCGCGGCCCTCCTCCTGGCCCACGGGCTCCATACAACCAGCGTTGTCGGGATAAGTTACGGCGGCTTCGTGGCGTACAGCCTGGCGGCGCAGTTTCCGGAGCTTGTGGAGAAGGTGGTGCTATGCTGCGCCGGGGTGTGCTTGGAAGATAAGGACTTGGATGAAGGGATGTTCCAGGTGAAAACTGTTGATGAGGCTGTGGATATTTTGCTGCCGCAGACGCCGGAAAAGTTGAGGCAGCTCGTGCAAATCGCGTTTGCCATGCCTGTCAAAGCCATTCCCACTTGCTTCCTCAATGATTACATTAACGTGATGTGTACTGAAAACCGCCAAGAGAGGAAAGAATTAATCGAAACATTACATAAGGATAGAAAACTATCTAATCTTCCTAAGATAACCCAGCCTACGTTAATAATCTGGGGAGAAAAGGACCTGGTATTCCCAATGGAACTAGCTTATAGACTACAAAGGCATTTGGGAGAGAACGCGCGACTAGTGGTTATTAAGAATGCAGGGCATGCTCTCAATGTACAGAAGCCCAAGGAGATGTACAAGAATTTAAAATCCTTCCTCATTGATCTCACTACTCCAACTGTGCCAAAAAACCAAAGTAATGGGAACCACAAATACTACCACCAGCTAGCAGAAGTTCAGCAACGAAGTATCACGGGCAAGGTTGCATCATCCAGCCACAATTCTACTGGCAGGGTAAGTTTTATGGCTGCAACAAGTTCAAGCTTTTTTTCTCAAGATTCCACACTACTCAATGTGGGTGCACCCCAAACTTTTAATCATCGCAAGGGATCAAGGTTAATTGTTAGAGCAAATGCTGATTATTATTCTGTCCTTGGGGTTTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCATATCGGAAGCTTGCCCGGAATTATCATCCAGATGTCAACAAAGAACCTGGTGCTGAACAAAAATTTAAGGAAATTAGCAATGCCTATGAGGTGTTATCAGATGATGAGAAACGATCCATATATGACAGGTTTGGAGAGGCTGGGCTTAAAGGTTCTGCAATGGGGATGGGGGATTTCAGCAATCCATTTGATCTGTTTGAATCACTGTTTGAGGGCATGAATCGTGGCGCAGGTTCCAGAGGTTCTTGGAATGGAGCAATTGATGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGCATAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGCTGTGGAACTTGCAATGGTTCaggggctaaaccagggactacaccatccagatgtagcacttgtggaggtcaaggccgggttgtctcatcaacaagaactccattaggcatcttccagcagtcaatgacatgctcttcatgcaatgggactggagaaatttcaacaccttgcaatacatgttctggggatggtcgggtaaggaaatcaaaacggaTAAGTCTGAAGGTTCCAGCTGGTGTGGACTCTGGTAGTCGTCTAAGGGTCCGGAATGAGGGGAATGCTGGAAGGAAAGGTGGTTCCCCTGGTGACCTCTTTGTAGTTATTGAGGTTATCCCAGATCCCATCCTTAAACGTGATGACACCAACATTTTATACACCTGCAAGGTTTCGTATATTGATGCAATCCTGGGGACTACAATTAAGGTTCCTACTGTAGATGGAACGGTCGATTTGAAAATTCCTGCTGGGACACAACCGAACACAACACTTGTTATGGCTAAGAAAGGTGTTCCCTTCCTGAATAAAGACAATATGAGGGGTGATCAATTGGTTCGTGTGCAAGTTGAAATCCCTAAAAGACTGAGCAATGATGAGAGAAAGCTTATTGAAGAACTTGCTGATTTAAGCAAAGGCAAAACTGCCACCGGTCTAGATTGA 2217 0.4389 MAACISFTATRDRCFRFTFSNAGLKSATTDLGDGTIMHWWAPKAPKDSKPNLLLLHGFGANAMWQWNDVLSPLTRRFNVYVPDLVFFGDSHTTRPERSEAFQAQCVAALLLAHGLHTTSVVGISYGGFVAYSLAAQFPELVEKVVLCCAGVCLEDKDLDEGMFQVKTVDEAVDILLPQTPEKLRQLVQIAFAMPVKAIPTCFLNDYINVMCTENRQERKELIETLHKDRKLSNLPKITQPTLIIWGEKDLVFPMELAYRLQRHLGENARLVVIKNAGHALNVQKPKEMYKNLKSFLIDLTTPTVPKNQSNGNHKYYHQLAEVQQRSITGKVASSSHNSTGRVSFMAATSSSFFSQDSTLLNVGAPQTFNHRKGSRLIVRANADYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRFGEAGLKGSAMGMGDFSNPFDLFESLFEGMNRGAGSRGSWNGAIDGEDEYYSLVLNFKEAVFGIEKEIEISRLESCGTCNGSGAKPGTTPSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNAGRKGGSPGDLFVVIEVIPDPILKRDDTNILYTCKVSYIDAILGTTIKVPTVDGTVDLKIPAGTQPNTTLVMAKKGVPFLNKDNMRGDQLVRVQVEIPKRLSNDERKLIEELADLSKGKTATGLD 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01240 738 ProSitePatterns Nt-dnaJ domain signature. 424 443 IPR018253 -
Gma08g01240 738 PRINTS Alpha/beta hydrolase fold signature 120 133 IPR000073 -
Gma08g01240 738 PRINTS Alpha/beta hydrolase fold signature 241 255 IPR000073 -
Gma08g01240 738 PRINTS Alpha/beta hydrolase fold signature 76 91 IPR000073 -
Gma08g01240 738 PRINTS Alpha/beta hydrolase fold signature 134 147 IPR000073 -
Gma08g01240 738 PRINTS Epoxide hydrolase signature 120 133 IPR000639 GO:0003824
Gma08g01240 738 PRINTS Epoxide hydrolase signature 76 91 IPR000639 GO:0003824
Gma08g01240 738 PRINTS Epoxide hydrolase signature 273 295 IPR000639 GO:0003824
Gma08g01240 738 PRINTS Epoxide hydrolase signature 239 255 IPR000639 GO:0003824
Gma08g01240 738 Pfam Alpha/beta hydrolase family 52 287 IPR000073 -
Gma08g01240 738 Gene3D - 491 626 - -
Gma08g01240 738 Gene3D DnaJ domain 380 484 IPR036869 -
Gma08g01240 738 CDD DnaJ_zf 521 584 IPR001305 GO:0031072|GO:0051082
Gma08g01240 738 Gene3D - 631 737 - -
Gma08g01240 738 SUPERFAMILY HSP40/DnaJ peptide-binding domain 489 643 IPR008971 GO:0006457|GO:0051082
Gma08g01240 738 ProSiteProfiles dnaJ domain profile. 383 447 IPR001623 -
Gma08g01240 738 TIGRFAM DnaJ_bact: chaperone protein DnaJ 383 727 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gma08g01240 738 Hamap Chaperone protein DnaJ [dnaJ]. 380 734 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gma08g01240 738 Pfam DnaJ domain 383 444 IPR001623 -
Gma08g01240 738 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 325 734 - -
Gma08g01240 738 SUPERFAMILY alpha/beta-Hydrolases 25 296 IPR029058 -
Gma08g01240 738 PRINTS DnaJ domain signature 403 418 IPR001623 -
Gma08g01240 738 PRINTS DnaJ domain signature 439 458 IPR001623 -
Gma08g01240 738 PRINTS DnaJ domain signature 385 403 IPR001623 -
Gma08g01240 738 PRINTS DnaJ domain signature 419 439 IPR001623 -
Gma08g01240 738 Gene3D alpha/beta hydrolase 13 300 IPR029058 -
Gma08g01240 738 PANTHER BNAA01G34580D PROTEIN 325 734 - -
Gma08g01240 738 ProSiteProfiles Zinc finger CR-type profile. 508 589 IPR001305 GO:0031072|GO:0051082
Gma08g01240 738 SMART dnaj_3 382 439 IPR001623 -
Gma08g01240 738 SUPERFAMILY Chaperone J-domain 380 478 IPR036869 -
Gma08g01240 738 Gene3D - 521 584 - -
Gma08g01240 738 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 508 588 IPR036410 -
Gma08g01240 738 SUPERFAMILY HSP40/DnaJ peptide-binding domain 636 722 IPR008971 GO:0006457|GO:0051082
Gma08g01240 738 CDD DnaJ 383 436 IPR001623 -
Gma08g01240 738 Pfam DnaJ central domain 521 584 IPR001305 GO:0031072|GO:0051082
Gma08g01240 738 CDD DnaJ_C 492 714 - -
Gma08g01240 738 Pfam DnaJ C terminal domain 496 711 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01240 Gma-Chr8 10530423 10541779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01240 384 444 C2H2 Transcription Factor Family AT1G74250 44.776 1.80e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01240 K03686 - gmx:100811006 813.913