Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01235 ATGGAAGAGGAAGAGCACGAGGTGTACGGAGGAGAGATCCCTGACGAGGGAGAGATGGAAGGAGACATTGACATGTccgccgccgacgatgaagccgccgtcgacgatgacgccgccgtcAAGGAGCTCGACGAGATGAAGCGCCGATTGAAGGAAATGGAAGAGGAAGCCGCAGCGCTTCGCGAGATGCAAGCCAAGGTCGAGAAGGAGATTGGCAGCGTTCAAGATCCTGCTAATGCAGCTGCTTCTCAGGCAAACAAGGAGGAGGCAGATGCTCGGTCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAACACTTTCAGTCCTGTGGTACTGTAAACAGGGTCACTATCCTGACAGACAAGTTTGGCCAGCCTAAAGGTTTTGCTTATGTGGAATTTGTTGAAGCTGAGGCTGTTCAAGAGGCTCTCCTGTTGAATGAATCTGAATTGCATGGCCGTCAATTGAAGGTTTTGCCTAAGAGGACCAATGTTCCTGGAATGAAACAATATCGTCCTAGGTGCTTTAATCCTTACATGGCGTATGGCTTCAGGAGGCCATATACTCCTTACTTGTATTCCCCTTATGGGTATGGGAAGGTTCCTAGGTTTAGAAGGCCAAATCGTTACATGCCGTACTACTAG 663 0.448 MEEEEHEVYGGEIPDEGEMEGDIDMSAADDEAAVDDDAAVKELDEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRCFNPYMAYGFRRPYTPYLYSPYGYGKVPRFRRPNRYMPYY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01235 220 SUPERFAMILY RNA-binding domain, RBD 83 186 IPR035979 GO:0003676
Gma08g01235 220 MobiDBLite consensus disorder prediction 1 21 - -
Gma08g01235 220 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 169 IPR000504 GO:0003723
Gma08g01235 220 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 1 218 - -
Gma08g01235 220 SMART rrm1_1 94 165 IPR000504 GO:0003723
Gma08g01235 220 CDD RRM_II_PABPs 94 165 - -
Gma08g01235 220 Gene3D - 20 176 IPR012677 -
Gma08g01235 220 PANTHER - 1 218 - -
Gma08g01235 220 Coils Coil 36 70 - -
Gma08g01235 220 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 163 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01235 Gma-Chr8 10504637 10509631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01235 90 164 Eukaryotic Initiation Factors Gene Family AT2G36660 34.211 1.63e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01235 K14396 - gmx:100809403 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01748 05 39132220 39136356 Gma08g01235 08 10504637 10509631 GST