Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01225 ATGGGGACTCAAAAACTGAGGAAGAGGAGAAAGTCTACTCTTGGTTATACACCCTGGCTCAGTCTCACAAAAACTTGGTCTTCGAGCTTAAGTTTCACAGAAGCCGATAGGAGACTGAGGGAAAATGGGCCAAATGTTCCACTTGAGTATTCCTTTCCAAGATGGTGGCATCTTCTATGGAACGCTCTTTTCCATCCTTTCATTATCACTCTGATTGTTTTGTCAGCTCTGTCATTCATTACCTGTGACAGTCCAAATGGGTTTATCATGCTCATATTGGTTATCATCAGTGTCACCCTTCGTTTCTATCAGGAATACAGCAGCTCAAAAGCAGCAATGAAGCTTTCAGAATTTGTAAAATGTCCAATAAAAGTTCAAAGATGCGCCGGTAGAGTTGTTCAGAAAGAACTTGTAGTTCAAGTTGATCAGAGAGATGTAGTTCCAGGTGACATTGTGATTTTTGAACCTGGTGACCTCTTTCCAGGAGATATCAGGTTGTTATCTTCTAAACAACTTGTTGTAAGCCAGGCATCACTAACAGGGGAATCTTGGACAACTGACAAAACTGCTGAAATCAGAGAAGATCACAGCACTCCTTTATTGGATTTGAAGAACATCTGCTTTATGGGCACAAGCGTGGTATCTGGTACTGGAACAGGCCTAGTGATTTCCACTGGATCCAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAGAAGAAGCCACCAGATGAATTTGAAAAGGGTCTCAGACGGATATTTTACTTGCTTATTTCTGTCATTCTAGTAGTTGTTACCATCATGTTTGTGATAAATTACATTACATCTCTTAATTTGAGCCAAAGTGTTCTTTTTGCCATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATCATTAACACATGTCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGATGTATAGTAAAAAGTTTAACATCTATACGCGACATGGGATCAATGGATATTCTTTGTATTGATAAGACAGGCACCCTTACAATAAATCACGCAATCATGGTTAATCATCTTGACTGCAGGGGTTTACCCCAAGAAAAAGTCTTACGCTATGCCTTTTTCAACTCTTACTTTAAGAGTGATCAGAAGTATCCTCTGGATGATGCAATTCTGGCATTTGTATATTCAAATGGATTCAGGTTTCAGCCATCTAAGTGGAGGAAGATAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTATCATCTTAGAAACAGAAGACAAACACTCACAATTCTTTGGCAGGTTCCTGGTAACAAAAGGAGCACTGTTAGAAGTATTGAGAGTTTGTTCTTTCATTGAGAATTTCGATAAAGATGAAATTTCGCCCTTCTCTTCAGATGATTATCAGCGGATTTTAAATCTCTCAGAAGATTTGAGCAATGAGGGGTTAAGGGTTATAGCAGTAGCTATAAGGAAGCTGAAAATGCCGCAAAAATGCGAAACAAGTAATGGAAGCAAAAGAGAAGAGGAGGATATTGAAAGAGACATGATGTTCCTTGGCCTCATAACATTTTTCGACCCACCAAAGGACTCAGCAAAGCAAGCACTGCGGCGTTTGTCTGAGAAGGGAGTGAAGGCAAAGGTTTTAACTGGTGACTCCCTCTCCTTGACAACAAGGGTATGCAGGGAAGTTGGCATAAGCACCACTCATGTAATAACAGGTCCCGAACTAGAGCAACTTGACCAAGACACTTTCCATGAAACAGTTCAAAGAGCCACAGTACTAGCCCGTCTCACCCCAATTCAGAAACAACGAGTGGTGCAATCCTTGCAAACAATTGAAAACCACGTTGTTGGGTTCTTAGGAGATGGAGTGAACGATTCACTAGCCTTAGATGCTGCCAATGTAAGCATTTCAGTGGACTCAGGTGTAGCCATTGCCAAAGACATGGCTGATATTATCTTACTTGAGAAAGACCTCAACGTGCTTGTTGCAGGAGTGGAGCATGGTAGAATCTCTTTTGGCAACACAATGAAGTATGTAAAGATGTCAGTGATAGCTAACTTGGGAAGTGTCATTTCACTCCTCATTGCAACACTTTTATTCAAGTATGAGCTCTTAACTTCTAGACAGCTTCTTACTCAGAATTTCATCTACAGTGTGGGACAGATTGCCATTGCTTGGGACAAAATGGATGAAGAGTATGTTAAGACACCTCACAAGTCCTCAGAGAGAGGCTTGTCCATGTTCATATTGTGGAATGCACCAGTGTGCACCCTTTGTGATGTGGCAACACTTTTGCTTCTTCGGTTTTATTACAAGGCTTACACCGATGTGACTCGAAAGTTTTTCCATTCTGCTTGGTTCGTTGAAGGTCTTCTATTGCAGACCCTCATCATCCATTTGATAAGGACAGAGAAAAATCCTTTCATACAGGATGTTGCATCTTGGCCTGTGATTTTCTCCACTGTTGTGACATCTGCAATTGGAATTGCACTTCCATTCACACTCATTGGGAAGATCTTGGGATTCTCCGTTATACCTATCTCATATTTCGGATTTTTGGTGCTTCTTTTTCTGGGGTATTTTGCAGTTGGCCAAGTGGTTAAGAGACTTTACATATTGGTTTATAAGAGATGGCTTTGA 2646 0.4089 MGTQKLRKRRKSTLGYTPWLSLTKTWSSSLSFTEADRRLRENGPNVPLEYSFPRWWHLLWNALFHPFIITLIVLSALSFITCDSPNGFIMLILVIISVTLRFYQEYSSSKAAMKLSEFVKCPIKVQRCAGRVVQKELVVQVDQRDVVPGDIVIFEPGDLFPGDIRLLSSKQLVVSQASLTGESWTTDKTAEIREDHSTPLLDLKNICFMGTSVVSGTGTGLVISTGSNTYMSTMFSKVGKKKPPDEFEKGLRRIFYLLISVILVVVTIMFVINYITSLNLSQSVLFAISVASALNPQMLPLIINTCLAKGALAMAKDRCIVKSLTSIRDMGSMDILCIDKTGTLTINHAIMVNHLDCRGLPQEKVLRYAFFNSYFKSDQKYPLDDAILAFVYSNGFRFQPSKWRKIDEIPFDFIRRRVSIILETEDKHSQFFGRFLVTKGALLEVLRVCSFIENFDKDEISPFSSDDYQRILNLSEDLSNEGLRVIAVAIRKLKMPQKCETSNGSKREEEDIERDMMFLGLITFFDPPKDSAKQALRRLSEKGVKAKVLTGDSLSLTTRVCREVGISTTHVITGPELEQLDQDTFHETVQRATVLARLTPIQKQRVVQSLQTIENHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRISFGNTMKYVKMSVIANLGSVISLLIATLLFKYELLTSRQLLTQNFIYSVGQIAIAWDKMDEEYVKTPHKSSERGLSMFILWNAPVCTLCDVATLLLLRFYYKAYTDVTRKFFHSAWFVEGLLLQTLIIHLIRTEKNPFIQDVASWPVIFSTVVTSAIGIALPFTLIGKILGFSVIPISYFGFLVLLFLGYFAVGQVVKRLYILVYKRWL 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01225 881 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 587 700 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g01225 881 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 90 376 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g01225 881 SUPERFAMILY HAD-like 512 669 IPR036412 -
Gma08g01225 881 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 21 880 - -
Gma08g01225 881 Gene3D - 334 658 IPR023214 -
Gma08g01225 881 SFLD Haloacid Dehalogenase 319 671 - -
Gma08g01225 881 SUPERFAMILY Calcium ATPase, transduction domain A 131 236 IPR008250 -
Gma08g01225 881 Pfam E1-E2 ATPase 131 316 - -
Gma08g01225 881 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 332 528 IPR023299 GO:0000166
Gma08g01225 881 Pfam haloacid dehalogenase-like hydrolase 333 635 - -
Gma08g01225 881 Gene3D - 121 225 - -
Gma08g01225 881 SUPERFAMILY Calcium ATPase, transmembrane domain M 30 878 IPR023298 -
Gma08g01225 881 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 25 880 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 ProSitePatterns E1-E2 ATPases phosphorylation site. 339 345 IPR018303 -
Gma08g01225 881 Gene3D - 86 832 - -
Gma08g01225 881 PANTHER CATION TRANSPORTING ATPASE 21 880 - -
Gma08g01225 881 Pfam Cation transporter/ATPase, N-terminus 30 78 IPR004014 -
Gma08g01225 881 SFLD p-type atpase 319 671 IPR044492 -
Gma08g01225 881 Gene3D - 349 525 IPR023299 GO:0000166
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 250 266 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 679 694 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 749 765 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 267 286 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 371 384 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 834 855 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 784 805 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gma08g01225 881 PRINTS Magnesium-transporting ATPase signature 729 742 IPR006415 GO:0015444|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01225 Gma-Chr8 10384977 10389660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01225 27 744 Primary Pumps ATPases(2) AT1G10130 26.161 8.62e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01225 K01531 - gmx:100778221 1617.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01738 05 38998115 39003439 Gma08g01225 08 10384977 10389660 GST