Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01214 atgtccaaaccctggggcaacatcggagcctgggccgccgattccgagcgggccgaagccgaagaggccgaggcccaggctgcggccgcggcggttgagccccaaagctttcccagcctcaaggaggccgtgaactccaagcccaagaagaagaagggaaccaccatcacgctttccgagttcaaccgtggcggtttcgaccagggccttacgcgcgacgagatgctcacccttccgaccgggcccaaggagcgttccgccgaggaaatgcagttcaaccgcctcggcggcggtttctcctcctacgaccgctccggcggtcgctcgcgcgaccgcgacggtggcaacaacgaaggttcgtggggcggaggaggcagaagatcctacggtggattcgacgaggagcgcaggggtccgaatcctagggtTTCGGAACTCGATCAGCCGTCCAGGGCTGATGAGGTTGATAATTGGGCGTCCGTGAAGAAATCTCTCCCTGCCTACGATTCCGGTCGCCAGAATCGCTATGGTGGTGGCGGAGGCGGCggttttggtggtagttctggtggtggtggttttggtggtagttctggtggtggtggttttggtggtggcggcggttttggtggtggtggtggtgggggcggatttggAGGCGCGTCTAGGGCTGATGATGTGGACAATTGGGCGGTTGGTAAGAAGCCTGCTCCTGTTAGATCTTCCAATTTCGGTTCCAGTTTTCGCGATTCCGGCGTGGAGCCTGATCGTTGGACGAGAGGGGATCCGCCGCGTGAGGTTGAGCAGCGGACGGAGAGGCCAAGGCTGGTGTTGGATCCGCCTCGAGGCGATGGTTTGGTGAATGAGTCTCCGGTGAAGGCGATGGATAAGGCGAATCCGTTTGGGGCGGCGAGGCCGCGGGAGGAGGTGTTGGCTGAGAAGGGTTTGGATTGGAAAAAGCTGGATTCGGAGATTGAGACTAAGAAGACGAGCCGTCCCACGAGTTCGCACTCTAGCAGGCCTTCCAGTGCTCAGTCCAATCGTTCTGAGGGTCCCGGGTTGCAGGGGACCGATGCTGTGGTTAAATCCAGGCCCAAGGTGAACCCCTTTGGGGATGCCAAGCCTAGGGAGGCTGTGCTGGGCGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGAATTGGAGCGTCGCTCTGTTGCCAGGCCTGAGACAATGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTAAAGAAGGAACTTGAGAAAGAGTCTACAATAAATTCAAATAAGGAATCTGTGGATGAGGCTGGTGGAGACCAAACCAGTAGACATGCAATATTACAACAGAAAGAAAAGGAGCTGGAACTTCTTATCCATGATTTGGACGGCAAAGTTCGTTTTGGGCAGAAAGCCGTTGAAAGGCCAGGTTCATCGGCAGGGAAGTCTTCTACTTTTTCTGATCGGCCACCTTCTAGATCTGGTTCCTTTGAGGATTCTAGAAGTGTGGATTTTACAGACAGACCTCGATCTCGTGGTACAGGAGATATGTGGATGCGTCCTAGTGATGACAGAAGACAGTTTCAAGGTGGTAGCAGGGAAAGGGGATGGTTTTCTTCTGGCAGCAGAAATAGGTCAACGTCAAGAGAGAGATGGTGA 1656 0.3502 MSKPWGNIGAWAADSERAEAEEAEAQAAAAAVEPQSFPSLKEAVNSKPKKKKGTTITLSEFNRGGFDQGLTRDEMLTLPTGPKERSAEEMQFNRLGGGFSSYDRSGGRSRDRDGGNNEGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSLPAYDSGRQNRYGGGGGGGFGGSSGGGGFGGSSGGGGFGGGGGFGGGGGGGGFGGASRADDVDNWAVGKKPAPVRSSNFGSSFRDSGVEPDRWTRGDPPREVEQRTERPRLVLDPPRGDGLVNESPVKAMDKANPFGAARPREEVLAEKGLDWKKLDSEIETKKTSRPTSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMDWRKIDLELERRSVARPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSRHAILQQKEKELELLIHDLDGKVRFGQKAVERPGSSAGKSSTFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMWMRPSDDRRQFQGGSRERGWFSSGSRNRSTSRERW 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01214 551 MobiDBLite consensus disorder prediction 476 498 - -
Gma08g01214 551 Coils Coil 13 33 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 39 382 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 420 447 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 129 158 - -
Gma08g01214 551 Coils Coil 406 426 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 306 332 - -
Gma08g01214 551 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 551 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 1 23 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 468 551 - -
Gma08g01214 551 Pfam Plant specific eukaryotic initiation factor 4B 1 188 IPR010433 GO:0003743
Gma08g01214 551 Pfam Plant specific eukaryotic initiation factor 4B 207 535 IPR010433 GO:0003743
Gma08g01214 551 MobiDBLite consensus disorder prediction 333 352 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 252 278 - -
Gma08g01214 551 MobiDBLite consensus disorder prediction 499 530 - -
Gma08g01214 551 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 551 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01214 Gma-Chr8 10310097 10315086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01214 1 551 Eukaryotic Initiation Factors Gene Family AT3G26400 53.472 2.65e-147 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01214 - - gmx:100803366 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01214 08 10310097 10315086 Gma08g01214 08 10310097 10315086 ECH
Gma05g01728 05 38914067 38919586 Gma08g01214 08 10310097 10315086 GST