Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01162 atgggcaagactcctttctcctttcgtcgctccgcctctcgccgccgccccaagaagaccgccgccccgccccctcctccctctccgccgcaacatccctacgcggccggattcgccgcctcacccgacgacaacaaccgtctcatcgccgccgccgccggcagcagcgccttgacgaaggcgaagaagaagaccggcaacgtccgcttgtggatgaggtttgaccggtccggccggtcagaaCTGGTGGAGTTGGAGAAGAACGCCATCGTCCGCCACGCAGCGATTCCCGCTAGAGACTTGCGAATTTTGGGCCCCGTCTTCTCCCACTCCTCCAACATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCAATTGTGACTGCTGAAGAAGTGTTATTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCAACAGCTTCCTGGCAAAAGTCAACCTAAACTTCTCGGCGGCACGGAAGAGCAGGAAGGCGAAATGCATGTCTCTAATGGAAGACAATGGTTGCCTACACCGGAGGCAGCCGATGGTTTGCAGTCTGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAGGCTGTGTGCACTTATCTGGACTCGAATGTGGCGGACCTTGAGCGAGGTGCTTACCCTGTGTTGGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTTGAGCATGTGCGGAGTTTAAAGAGTAATCTTACGCGGTTGCTGGCACGAGTGCAGAAGGTGCGAGATGAAATTGAACATCTGTTAGATGACAATGAAGATATGGCACAACTATATTTGACAAGGAAGTGGTTGCAGAATCAACAATTTGAGGAGGCTCATTTGGGTGCCACAACCTCAAATAACTTTCCTAATACCTCACGTTCTGTTCGTCAACTTGGTTCTATCAGAAGTGAAAGTCTTGTGACCAGCCATTATGAGGATGATAACAATGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTGGATGGAACTCGTAACAAAATATTATCAGTTAGGGAGTATATTGACGACACTGAAGACTATGTCAACATCCAACTTGATAACCACCGAAATGAACTTATTCAGCTGCAGTTGACGTTGACTATTGCATCATTTGCTATTGCTATTGAAACTTTGATTGCTGGTGCATTTGGTATGAACATTCCTTGTAACTTATATAACATTGATGGAGTATTTTGGCCCTTCGTTTGGACCACGTCTGCGGCTTGCGTATTACTTTTCTTGCTTATTTTAGCATATGCAAGATGGAAGAAGTTGCTGGGATCATAA 1353 0.3659 MGKTPFSFRRSASRRRPKKTAAPPPPPSPPQHPYAAGFAASPDDNNRLIAAAAGSSALTKAKKKTGNVRLWMRFDRSGRSELVELEKNAIVRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPGKSQPKLLGGTEEQEGEMHVSNGRQWLPTPEAADGLQSELPFEFQVLEIALEAVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEEAHLGATTSNNFPNTSRSVRQLGSIRSESLVTSHYEDDNNVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCNLYNIDGVFWPFVWTTSAACVLLFLLILAYARWKKLLGS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01162 450 MobiDBLite consensus disorder prediction 1 40 - -
Gma08g01162 450 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 386 438 IPR045863 -
Gma08g01162 450 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 450 - -
Gma08g01162 450 MobiDBLite consensus disorder prediction 19 33 - -
Gma08g01162 450 Pfam CorA-like Mg2+ transporter protein 326 443 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gma08g01162 450 Gene3D Magnesium transport protein CorA, transmembrane region 144 381 - -
Gma08g01162 450 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 450 IPR039204 -
Gma08g01162 450 CDD Mrs2_Mfm1p-like 71 447 IPR039204 -
Gma08g01162 450 Gene3D Magnesium transport protein CorA, transmembrane region 388 448 - -
Gma08g01162 450 Gene3D - 56 142 - -
Gma08g01162 450 Coils Coil 247 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01162 Gma-Chr8 9890234 9893826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01162 1 450 MRS2 Gene Family AT3G58970 65.198 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01162 K16075 - gmx:100786220 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01674 05 38466294 38469814 Gma08g01162 08 9890234 9893826 GST
Gma08g01162 08 9890234 9893826 Gma18g00104 18 822282 837170 PCT
Gma08g01162 08 9890234 9893826 Gma11g02473 11 39998116 39999679 PCT