Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01161 ATGGCAAATTCAAAGGGCTCATCGAGTTTCAGAAATTTTATGTATCCTGGAAAGCATCCTCTACTTCCTCCTAAAAGTCCGTTTCCTAGTGTTTCCCAAGCATATGCTGATTATGTCCCAAATCCCGCTGTTGGTTTAAAGGCTGGTAACAGACCGAGAGATGGAAACACACACCACCAACGTACTTCATCTGAGAGCCTAGTTATAGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTCCGAAGAGGTGGACATCGACGTTCATCAAGTGATTCTTTTGCGTACATAGACACTGTTAATGCATCTAACCTCAATTATGCTAGTCAGGACGAATATAAATATAAGAATATGATGTCTATTCCACCTTGGTCACCTCAAGATTTTGACTGCAGCAAAGATGCTCGTCATGTGCCTGTTTATGCAGAAATGAACTCCACAAAACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCCATGACAAATCCAGTTGGTGTTCCCTCAGGCAAAGACAGTGCTGCTTTTCAGAGTTCAGGATTGCAATGTACACCACATGAAGCAGATGCTCTTCCACCAGCTGCAAGTGAAAAGCATGATTCAGTAGAATTGGGTTTACAGGATGCAAAATCCTTTCCTGAAAAAAAGGACATTTCACATGCAAAGTCATCTGCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGGAAACTTCAATACATAGCGGAGCTGGAAAGGAATGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTCTCAGCCGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTCTAGAAAATATAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCATTGTATCAACAGCAGCAACAACCACCACAGACACAGCCACAACAGCAACCATCTGGTAGTCACAGACGCTCGAACAGTAGAGAACTCGAATCTCAGTTTGCAAACCTTTCTCTAAAACACAAGGACACCAATTCAGGGCAAGACCCTGCTCTCAGAATTTAG 1131 0.4297 MANSKGSSSFRNFMYPGKHPLLPPKSPFPSVSQAYADYVPNPAVGLKAGNRPRDGNTHHQRTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNLNYASQDEYKYKNMMSIPPWSPQDFDCSKDARHVPVYAEMNSTKQKNRSWDSFSNAMTNPVGVPSGKDSAAFQSSGLQCTPHEADALPPAASEKHDSVELGLQDAKSFPEKKDISHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENIAQEQLIKYLEQEVLEREIGRLRALYQQQQQPPQTQPQQQPSGSHRRSNSRELESQFANLSLKHKDTNSGQDPALRI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01161 376 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Gma08g01161 376 MobiDBLite consensus disorder prediction 326 345 - -
Gma08g01161 376 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Gma08g01161 376 MobiDBLite consensus disorder prediction 215 242 - -
Gma08g01161 376 Coils Coil 248 303 - -
Gma08g01161 376 MobiDBLite consensus disorder prediction 148 184 - -
Gma08g01161 376 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Gma08g01161 376 MobiDBLite consensus disorder prediction 191 210 - -
Gma08g01161 376 Gene3D - 237 289 - -
Gma08g01161 376 MobiDBLite consensus disorder prediction 352 367 - -
Gma08g01161 376 MobiDBLite consensus disorder prediction 215 243 - -
Gma08g01161 376 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 369 IPR044797 -
Gma08g01161 376 MobiDBLite consensus disorder prediction 326 376 - -
Gma08g01161 376 PANTHER - 1 369 - -
Gma08g01161 376 MobiDBLite consensus disorder prediction 43 70 - -
Gma08g01161 376 MobiDBLite consensus disorder prediction 150 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01161 Gma-Chr8 9879740 9885068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01161 71 307 bZIP Transcription Factor Family AT2G42380 31.452 2.35e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01161 - - gmx:100101887 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01161 08 9879740 9885068 Gma08g01161 08 9879740 9885068 ECH
Gma05g01673 05 38456227 38460709 Gma08g01161 08 9879740 9885068 GST