Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01156 ATGGAAAGCATTGCCGCGCAGCTGAAGCGCGGCATCTCCCGGCAGTTCTCGTCGGGGTCGCTGCGGAGGAACCTCTCGCGCCAGTTCACTCGCCAAGCCTCTCTTGATCCCCGGCGTAACAACCAGCGCTTCAGCATCGGCCGCCAGTCCTCTCTCGATCCTATTCGCCGTAGCCCCGGCCCCGTCCAGCCCGAGCTCACCGTGCCCGAGAACCTGGACTCCACCATGCAGCTCCTCTTCATGGCCTGCCGCGGCGACGCCAAGGGAGTCGATGATTTGCTCAACGAAGGCATCGACGTCAACAGCATCGACCTCGACGGCCGCACCGCCCTCCACGTCGCCGCCTGCGAAGGCCACGTCGAAGTCGCCAGGCTCCTCCTCACCCGCAAGGCCAACCTCGACGCTCGCGATCGCTGGGGCAGCACCGCGGCCGCCGATGCCAAATATTATGGAAATACAGAAATTTATTACATGTTGAAGGCTCGGGGAGCGAAAGTGCCGAAAACCAGGAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCGGAATATGAACTCAACCCGTTAGAGCTACAGGTTCGGAAGAGTGATGGTATTTCAAAGGGAACATACCAAGTAGCTAAATGGAATGGCACCAAGGTTGCAGTGAAGATACTTGATAAGGACAGTTATTCAGATCCTGATACCATAAATGCTTTCAAACATGAACTCACATTATTAGAAAGGGTGCGGCATCCGAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAGAATATACCCATGATGATTGTGAGAGAGTACCATTCTAAGGTAGGCTTACCCTCTCTGTTCCTCTGTATCTTTGCAAAGTACTCACCTTTCTTTGCATATATCAATGTTGATTTTCAGGGTGACCTGGCAAGCTATCTTCAAAAGAAAGGGCGCTTGTCTCCATCAAAAGTTCTACGGTTTTGTCATGATATTGCTAGGCAAGTAACCATTTTCAAGGGACTATGCTGTACGAAATCTCTGGGCATGAACTATCTTCACGAATGCAAACCAGATCCGGTTATTCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAGTGGAGGGCAATTGAAGATAGCTGGATTTGGCACTGTGAGATTTTCACTAATTTCACCTGATGAAGCACAGCTGGTACAGCCTGAGCCTAACATTGATCTTTCAAGCTTGTATGTGGCACCGGAGATTTACAAAGATGAAGTTTTTGATAGAAGTGTGGATGCATATTCTTTTGGTCTCATTTTATACGAGATGATAGAGGGTACACAGCCCTTCCATCCGAAGTCCTCAGAGGAGGCAGTTAGACTGATGTGCTTAGAAGGGAAAAGACCAGCATTCAAGATCAAAACAAAACATTATCCTCCGGAGTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAACACCTGTTGTGAGGCCAACATTTTCTCAGGTCATTGTACGGTTGGACAAAATTGTTGCAAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTCCCTTGGAAATAA 1548 0.4851 MESIAAQLKRGISRQFSSGSLRRNLSRQFTRQASLDPRRNNQRFSIGRQSSLDPIRRSPGPVQPELTVPENLDSTMQLLFMACRGDAKGVDDLLNEGIDVNSIDLDGRTALHVAACEGHVEVARLLLTRKANLDARDRWGSTAAADAKYYGNTEIYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVAVKILDKDSYSDPDTINAFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVREYHSKVGLPSLFLCIFAKYSPFFAYINVDFQGDLASYLQKKGRLSPSKVLRFCHDIARQVTIFKGLCCTKSLGMNYLHECKPDPVIHCDLKPKNILLDSGGQLKIAGFGTVRFSLISPDEAQLVQPEPNIDLSSLYVAPEIYKDEVFDRSVDAYSFGLILYEMIEGTQPFHPKSSEEAVRLMCLEGKRPAFKIKTKHYPPELKELIEECWDPTPVVRPTFSQVIVRLDKIVANCSKQGWWKDTFKLPWK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01156 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Gma08g01156 515 Pfam Protein tyrosine and serine/threonine kinase 200 492 IPR001245 GO:0004672|GO:0006468
Gma08g01156 515 Gene3D - 33 185 IPR036770 -
Gma08g01156 515 SUPERFAMILY Protein kinase-like (PK-like) 208 490 IPR011009 -
Gma08g01156 515 Gene3D Phosphorylase Kinase; domain 1 187 270 - -
Gma08g01156 515 PIRSF ILK 289 514 - -
Gma08g01156 515 PIRSF ILK 8 279 - -
Gma08g01156 515 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 293 513 - -
Gma08g01156 515 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 276 - -
Gma08g01156 515 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Gma08g01156 515 MobiDBLite consensus disorder prediction 29 66 - -
Gma08g01156 515 SMART serkin_6 194 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01156 515 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 293 513 - -
Gma08g01156 515 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 276 - -
Gma08g01156 515 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Gma08g01156 515 ProSiteProfiles Protein kinase domain profile. 190 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01156 515 MobiDBLite consensus disorder prediction 29 52 - -
Gma08g01156 515 Gene3D Transferase(Phosphotransferase) domain 1 296 509 - -
Gma08g01156 515 SUPERFAMILY Ankyrin repeat 75 175 IPR036770 -
Gma08g01156 515 Pfam Ankyrin repeats (many copies) 93 143 IPR002110 GO:0005515
Gma08g01156 515 SMART ANK_2a 74 102 IPR002110 GO:0005515
Gma08g01156 515 SMART ANK_2a 106 135 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01156 Gma-Chr8 9834508 9839224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01156 1 515 MAP Kinase Kinase Kinase AT2G31800 71.512 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Gma08g01156 PK_Tyr_Ser-Thr 1.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01156 - - gmx:100784109 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01156 08 9834508 9839224 Gma08g01156 08 9834508 9839224 ECH
Gma05g01668 05 38413444 38418069 Gma08g01156 08 9834508 9839224 GST