Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01155 ATGGTGATCTGTTATAAACAGCTGGGAGAATATCATTTCTTTCTTGTTTTGCTTCTCATTTCAGTCCAATGCGTTATTGCCGCAAATAACATTTTGAAGCCCGGAGATACACTGAATACGAGAAGCCAGCTATGTTCAGAAAACAACATATACTGCATGGATTTTTCCCCATTAAACACAAATCCTATTGTAAACTACACTCACTTAAGCATCAGTGACAACAGAAAGGACGATAATTCCGCAGTGTGGGTTGCTAATAGAAATCAACCCGTTGACAAGCATTCTGCAGTTCTGATGCTAAACCACTCTGGTGTACTCAAAATTGAATCATCCAAAGATGCCAAACCCATCATCCTTTTTTCTTCACCTCAACCACTGAACAACAACAACACCGAAGCCAAGCTGTTGGATACAGGTAACTTTGTGGTGCAACAACTTCACCCCAATGGAACAAACACTGTGTTGTGGCAAAGTTTTGATTACCCTACTGATACTCTTCTCCCTGGGATGAAGTTAGGAGTTAATCACAAAACTGGTCATAACTGGTCACTTGTTTCGTGGTTGGCTGTATCCGACCCCAGAATCGGGGCATTCAGGTTCGAGTGGGAACCCATAAGAAGAGAATTGATCATCAAGGAACGAGGAAGATTGTCCTGGACAAGTGGAGAACTCAGAAACAACAATGGATCCATTCACAACACCAAGTACACGATTGTCTCAAACGACGACGAAAGCTACTTCACAATTACAACAACAAGTTCAAATGAACAAGAGCTTATAATGTGGGAAGTATTGGAAACTGGGCGGTTGATAGATAGGAATAAAGAAGCTATTGCAAGGGCTGATATGTGTTATGGTTACAACACAGATGGAGGGTGCCAAAAGTGGGAGGAGATACCCACATGTAGGCATAGCGGTGATGCATTTGAAACCAGGGAAGTTTACGTCAGTATGAACATGCTAAACAATCTAGGTAATTCGAGTTATGGCCCAAGTGATTGCCGGGATATTTGCTGGGAAAATTGTGCTTGTAATGGATACAGAAATTACTATGATGGTGGAACTGGTTGTACTTTCTTGCATTGGAATTCAACCGAAGAAGCTAATTTTGCAAGTGGGGGCGAAACGTTTCATATATTGGTCAACAACACCCACCACAAAGGTACAAAAAAGTGGATATGGATAACTGTAGCAGTAGTTGTTCCATTTGTGATATGTGCTTTCATTCTATTTCTGGCCTTGAAGAAAAGAAAACATCTGTTTGAAGAGAAGAAAAGAAATAGAATGGAGACTGGGATGTTGGATTCGGCAATTAAAGATCTTGAAGATGAGTTCAAGAAGAGACAAAATCTAAAAGTATTTAAGTATACTTCAGTACTGTCGgcaaccaatgatttttcaccagaaaacaagttaggacaaggaggctttggaccagtttataagggaatcctaccaactgggcaagaagctgctattaaaagactttcaaaaacatctagacaaggggttgtggaattcaaaaatgagctaatgctcatatgtgaacttcaacacatgaatcttgtacaactacttggatgctgcattcatgaagaagagaggattctaatttatgagtatatgccaaacaaaagcttggatttctatctattcggtATGGAATATGGTGCAGTCTATTTAATTAGGATATGCTTTAAATTGGAAAAGGCAAATTAA 1719 0.3357 MVICYKQLGEYHFFLVLLLISVQCVIAANNILKPGDTLNTRSQLCSENNIYCMDFSPLNTNPIVNYTHLSISDNRKDDNSAVWVANRNQPVDKHSAVLMLNHSGVLKIESSKDAKPIILFSSPQPLNNNNTEAKLLDTGNFVVQQLHPNGTNTVLWQSFDYPTDTLLPGMKLGVNHKTGHNWSLVSWLAVSDPRIGAFRFEWEPIRRELIIKERGRLSWTSGELRNNNGSIHNTKYTIVSNDDESYFTITTTSSNEQELIMWEVLETGRLIDRNKEAIARADMCYGYNTDGGCQKWEEIPTCRHSGDAFETREVYVSMNMLNNLGNSSYGPSDCRDICWENCACNGYRNYYDGGTGCTFLHWNSTEEANFASGGETFHILVNNTHHKGTKKWIWITVAVVVPFVICAFILFLALKKRKHLFEEKKRNRMETGMLDSAIKDLEDEFKKRQNLKVFKYTSVLSATNDFSPENKLGQGGFGPVYKGILPTGQEAAIKRLSKTSRQGVVEFKNELMLICELQHMNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFGMEYGAVYLIRICFKLEKAN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01155 572 SUPERFAMILY Protein kinase-like (PK-like) 448 556 IPR011009 -
Gma08g01155 572 Gene3D - 23 159 IPR036426 -
Gma08g01155 572 ProSiteProfiles Bulb-type lectin domain profile. 29 156 IPR001480 -
Gma08g01155 572 Pfam Protein tyrosine and serine/threonine kinase 469 551 IPR001245 GO:0004672|GO:0006468
Gma08g01155 572 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 188 IPR036426 -
Gma08g01155 572 SMART blect_4 29 162 IPR001480 -
Gma08g01155 572 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 11 553 - -
Gma08g01155 572 ProSiteProfiles Protein kinase domain profile. 466 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01155 572 Pfam D-mannose binding lectin 81 187 IPR001480 -
Gma08g01155 572 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 553 - -
Gma08g01155 572 Gene3D Phosphorylase Kinase; domain 1 428 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01155 Gma-Chr8 9823627 9827111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01155 395 555 Receptor kinase-like Gene Family AT4G23190 44.242 4.67e-35 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g01155 B_lectin 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01155 - - gmx:100809767 1140.56