Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01149 ATGGGTAATTGCTGGTGTAGGTGGGAGTCATCAGAGTATAGAGTTTCATCCAATGTAAAGTCAGAACAAAACCAGGGAACCAAACAGAGGCATGATGATAGTAAGTTACCATCAAATCCTGAAGAAGTAGAAGACCTACGGCGTGACTCAGCTGCAAATCCTTTGATTGCATTCACTTATGATGAGTTAAAGATTATCACAGCAAATTTTAGGCAAGATCGTGTGTTGGGGGGAGGAGGATTTGGAAGGGTTTACAAAGGATTCATTTCTGAGGAGTTAAGGGAAGGGCTTCCAACACTTGCTGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCTAGTAAAGTTAATTGGATATTGCTGTGAAGACGAACATAGGGTGCTAATATACGAGTACATGTCCCGGGGAAGTGTGGAACACAACTTGTTCTCAAAAATTTTGCTTCCCTTGCCATGGTCCATAAGAATGAAGATTGCGTTTGGCGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTATCGAGATTTCAAGACATCAAATATTTTATTGGACCAGGAGTACAATTCAAAACTTTCCGACTTTGGCCTTGCTAAGGATGGACCAGTTGGAGACAAATCCCATGTTTCTACTCGAGTAATGGGAACATATGGTTATGCCGCACCTGAATACATAATGACAGGTCATCTGACTCCTAGAAGTGATGTTTACAGCTTTGGTGTTGTTCTTCTTGAACTTCTCACTGGAAGAAAATCTTTAGACAAGTTAAGACCTGCTAGAGAGCAGAACCTTGCAGAATGGGCTCTTCCTTTGCTGAAGGAAAAGAAGAAATTTCTAAACATCATAGATCCAAGGTTGGATGGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTGCATATCATTGCTTGAACCGCAACCCGAAAGCAAGGCCTCTAATGCGAGATATTGTGGATTCATTGGAGCCTTTGCAGGCACACACAGAGGTCCCTATTGGAAAAACATTGACCATAATCAGTGAGGTTCCTGAATCTGGTTTGAAAATGAAAGATGATGCAATATGA 1146 0.418 MGNCWCRWESSEYRVSSNVKSEQNQGTKQRHDDSKLPSNPEEVEDLRRDSAANPLIAFTYDELKIITANFRQDRVLGGGGFGRVYKGFISEELREGLPTLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMSRGSVEHNLFSKILLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDQEYNSKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLAEWALPLLKEKKKFLNIIDPRLDGDYPIKAVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQAHTEVPIGKTLTIISEVPESGLKMKDDAI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01149 381 PANTHER OS01G0588500 PROTEIN-RELATED 10 361 - -
Gma08g01149 381 Gene3D Phosphorylase Kinase; domain 1 32 153 - -
Gma08g01149 381 CDD STKc_IRAK 76 351 - -
Gma08g01149 381 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 10 361 - -
Gma08g01149 381 Gene3D Transferase(Phosphotransferase) domain 1 154 363 - -
Gma08g01149 381 MobiDBLite consensus disorder prediction 15 46 - -
Gma08g01149 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Gma08g01149 381 SUPERFAMILY Protein kinase-like (PK-like) 46 348 IPR011009 -
Gma08g01149 381 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Gma08g01149 381 MobiDBLite consensus disorder prediction 25 46 - -
Gma08g01149 381 Pfam Protein tyrosine and serine/threonine kinase 72 348 IPR001245 GO:0004672|GO:0006468
Gma08g01149 381 ProSiteProfiles Protein kinase domain profile. 70 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01149 Gma-Chr8 9715117 9722399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01149 3 348 Glycoside Hydrolase AT3G07070 48.034 9.60e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma08g01149 PK_Tyr_Ser-Thr 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01149 - - gmx:100775722 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01661 05 38311597 38318355 Gma08g01149 08 9715117 9722399 GST